Cellulomonas iranensis: LFM56_08205
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Entry
LFM56_08205 CDS
T07886
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cira
Cellulomonas iranensis
Pathway
cira03030
DNA replication
cira03410
Base excision repair
cira03420
Nucleotide excision repair
cira03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cira00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LFM56_08205 (polA)
03410 Base excision repair
LFM56_08205 (polA)
03420 Nucleotide excision repair
LFM56_08205 (polA)
03440 Homologous recombination
LFM56_08205 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cira03032
]
LFM56_08205 (polA)
03400 DNA repair and recombination proteins [BR:
cira03400
]
LFM56_08205 (polA)
Enzymes [BR:
cira01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LFM56_08205 (polA)
DNA replication proteins [BR:
cira03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LFM56_08205 (polA)
DNA repair and recombination proteins [BR:
cira03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LFM56_08205 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LFM56_08205 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
DNA_pol_lambd_f
HHH
Motif
Other DBs
NCBI-ProteinID:
UCN16264
LinkDB
All DBs
Position
1828549..1831275
Genome browser
AA seq
908 aa
AA seq
DB search
MSADQPATSTTTTPRLLLIDGHSMAYRAFYALPVENFATSSGQPTNAVFGFTSMLANLLR
DEDPTHVAVAFDAGRTTFRTERLESYKGNRAATPEPFRGQVDVIKQLLATMHVQVLDKPG
FEADDILATLTTQAREQGMHVAICSGDRDSFQLVSETVTVLYPVRGVSEMARMTPEAVEA
KYGVPPERYPDVAALVGETSDNLPGVPGVGPKTAAKWIGQYDGLAGVLENAERITGKAGE
SLRAHVEQVALNRELNRLLTDLELPVGPEDLAVRPWDRAALHALLDELEFRTLRDRLFAM
LPDEGRDERVATAAALDLVETGVGGLAAWLDARRDDVLGLDVRGSGAPARGDAWGVAIAD
AAGQAVAYDLTAIDPADETALAAWLADPARGKALHAAKEAWHALDGRGLPLHGVTYDTEL
AAYLCQPDRRAYDLPDLAIGYLHRELGGDDDSSAGQGALDLEVDGADEGRRAAVRAAAVR
DLVDVLGAEVADRGAAGLLTDLELPLQDVLARMERTGIAIDRDDLTSLEREFDAQVQAAA
ADAYAVIGREVNLGSPKQLQEVLFDQLGMPKTKRIKTGYTTDAAALTDLFARTGHPFLEH
LLAHRDTIRLRQTVEGLLRSVGDDGRIHTTFQQTIAATGRLSSADPNLQNIPIRTEAGRQ
IRRTFVVGPGYATLLTADYSQIEMRIMAHLSGDEGLIAAFRSGEDLHSYVGSRVFGVPTD
EVTSAMRSKIKAMSYGLAYGLSSYGLSQQLSIEVSEASALMADYFERFGGVRDYLTGVVD
QARATGYTATILGRRRYLPDLTSDNRQRREMAERMALNAPIQGSAADLIKVAMLGVDREL
TRRGLTSRMLLQVHDELVLEVADGERDEVEALVREQMGHAGDGLPGGPLDVPLDVSVGVG
ASWHAAGH
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgccgaccagccagcgaccagcaccacgaccaccccgcgcctgctcctgatcgac
gggcactcgatggcgtaccgcgcgttctacgcgctccccgtggagaacttcgcgacgtcg
tcgggccagcccaccaacgcggtcttcggcttcacgtcgatgctcgcgaacctgctgcgc
gacgaggacccgacgcacgtcgcggtcgcgttcgacgcgggccgcacgaccttccgcacc
gagcggctcgagtcgtacaagggcaaccgcgccgcgacgcccgagccgttccgtggccag
gtcgacgtcatcaagcagctgctggcgaccatgcacgtgcaggtgctcgacaagcccggc
ttcgaggccgacgacatcctcgcgacgctcacgacgcaggcgcgcgagcagggcatgcac
gtcgccatctgctcgggcgaccgcgactcgttccagctcgtgtccgagacggtcaccgtg
ctgtacccggtccgcggcgtgtccgagatggcgcgcatgacgcccgaggcggtggaggcc
aagtacggcgtgccgccggagcgctaccccgacgtcgccgcgctcgtgggggagaccagc
gacaacctgccgggcgtccccggcgtggggcccaagacggccgccaagtggatcggccag
tacgacggcctggcgggggtgctcgagaacgccgagcggatcacgggcaaggccggggag
tcgctgcgcgcgcacgtcgagcaggtcgcgctcaaccgtgagctgaaccggctgctcacc
gacctcgagctcccggtcggccccgaggacctggcggtccgcccgtgggaccgcgcggcg
ctgcacgcgctgctcgacgagctcgagttccggaccctgcgcgaccggctgttcgcgatg
ctccccgacgagggacgcgacgagcgcgtcgcgaccgcggcggcgctcgacctcgtcgag
acgggcgtcggcgggctcgcggcctggctcgacgcgcgtcgcgacgacgtgctcggcctc
gacgtccgcggttccggcgcgcccgcgcgcggcgacgcgtggggcgtcgcgatcgcggac
gccgccgggcaggccgtcgcgtacgacctcacggcgatcgaccccgcggacgagaccgcg
ctcgcggcctggctcgcggaccccgcgcgcggcaaggcgctgcacgcggccaaggaggcg
tggcacgcgctcgacggtcgcggccttccgctgcacggcgtcacctacgacaccgagctc
gcggcgtacctgtgccagcccgaccggcgcgcgtacgacctgccggacctcgcgatcggc
tacctgcaccgcgagctggggggcgacgacgactcgtcggcgggccagggtgcgctcgac
ctcgaggtggacggcgcggacgaggggcggcgtgccgcggtgcgggcggccgcggtgcgc
gacctcgtggacgtgctcggcgccgaggtcgccgaccgaggggcggccgggctgctcacc
gacctcgagctgccgctgcaggacgtcctggcgcgcatggagcgcacgggcatcgcgatc
gaccgcgacgacctgacgtcgctcgagcgcgagttcgacgcgcaggtccaggccgccgcc
gccgacgcgtacgcggtgatcgggcgcgaggtgaacctgggatcgcccaagcagctgcag
gaggtcctgttcgaccagctgggcatgcccaagaccaagcggatcaagaccgggtacacg
accgacgcggccgcgttgacggacctgttcgcgcgcacggggcacccgttcctcgagcac
ctgctcgcgcaccgcgacacgatccggctgcgccagaccgtcgaggggctgctgcggtcc
gtcggcgacgacggtcggatccacacgaccttccagcagacgatcgccgcgaccgggcgc
ctgtcgtcggcggaccccaacctgcagaacatcccgatccgcaccgaggcgggccggcag
atccgccgcacgttcgtggtgggcccggggtacgccacgctgctcacggcggactactcg
cagatcgagatgcgcatcatggcgcacctgtcgggcgacgagggcctcatcgcggccttc
cgctcgggggaggacctgcacagctacgtcgggtcgcgcgtgttcggcgtgccgacagac
gaggtcacgtcggcgatgcggtcgaagatcaaggcgatgagctacggcctcgcgtacggc
ctgtcgtcgtacgggttgtcgcagcagctgtcgatcgaggtgtccgaggcgtcggcgctc
atggcggactacttcgagcgcttcggcggcgtgcgggactacctcacgggggtcgtcgac
caggcgcgcgcgaccggctacaccgcgacgatcctcggccgccggcggtacctgccggac
ctcacgagcgacaaccggcagcgccgcgagatggccgagcgcatggcgctcaacgcgccg
atccaaggcagcgcggccgacctcatcaaggtcgcgatgctcggtgtcgaccgcgagctg
acccgccgcgggctgacgtcgcgcatgctgctgcaggtgcacgacgagctcgtgctcgag
gtcgccgacggcgagcgggacgaagtcgaggcgctcgtgcgcgagcagatgggccacgcg
ggcgacggtctgccgggcggtccgctcgacgtgccgctcgacgtctcggtgggtgtcggg
gcgagctggcacgccgcggggcactga
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