Cellulomonas iranensis: LFM56_08265
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Entry
LFM56_08265 CDS
T07886
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
cira
Cellulomonas iranensis
Pathway
cira03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cira00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LFM56_08265 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cira03400
]
LFM56_08265 (uvrB)
DNA repair and recombination proteins [BR:
cira03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LFM56_08265 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LFM56_08265 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_16
AAA_22
AAA_5
UB2H
DUF87
Helicase_RecD
nSTAND3
E3_UFM1_ligase
AAA_7
AAA_19
SWI2_SNF2
AIG1
Motif
Other DBs
NCBI-ProteinID:
UCN16275
LinkDB
All DBs
Position
1844295..1846400
Genome browser
AA seq
701 aa
AA seq
DB search
MRPVTDLQRTVAPFEVVSEYTPSGDQPTAIAELAERVQAGEKDVVLLGATGTGKSATTAW
LIERLQRPTLVMAPNKTLAAQLATEFRELLPNNAVEYFVSYYDYYQPEAYIAQTDTYIEK
DSSINEEVERLRHSATSSLLTRRDVVVVATVSCIYGLGTPQEYVDRMVTLAVGDRIDRDQ
LLRQFVTMQYSRNDMAFTRGTFRVRGDTIEIIPVYEELAIRIEMFGDEIEAIATLHPLTG
DIVRDEQQVHVFPATHYVAGPERMERAITGIEAELAERLADLERQNKLLEAQRLQMRTTY
DIEMMRQIGSCSGIENYSRHIDGRAPGSAPHTLIDYFPEDFLLVIDESHVTVPQIGAMYE
GDRSRKRALVDHGFRLPSAIDNRPLRWEEFVERIGQTVYLSATPGDYELSMADGVVEQII
RPTGLVDPEVVVKPTKGQIDDLLGEIRTRVERDERVLVTTLTKKMSEDLTDYLLEKDVRV
RYLHSEVDTLRRVELLRELRLGEYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSGK
SLIQTIGRAARNVSGQVHMYADKITPAMRLALDETDRRREKQIAYNVEHGIDPQPLRKRI
GDITDMLAREDADTAELLGGGGRQASRGKAPVPGFGSRNAPHDERTRLTGAAAHELADLI
QQLTDQMHAAAGELQFELAARLRDEISGLKKELRQMQAATA
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgcgccccgtgaccgacctgcagcggaccgtcgcgccgttcgaggtggtgtccgagtac
accccgagcggcgaccagccgaccgcgatcgccgagctcgccgagcgcgtgcaggcgggc
gagaaggacgtcgtgctgctcggcgcgaccggcaccggcaagtccgcgaccaccgcgtgg
ctcatcgagcggctgcagcgtcccacgctcgtcatggcgcccaacaagaccctcgccgcg
cagctcgccacggagttccgtgagctgctgccgaacaacgccgtcgagtacttcgtctcg
tactacgactactaccagcccgaggcgtacatcgcgcagacggacacctacatcgagaag
gactcctcgatcaacgaggaggtcgagcggctgcggcactccgcgacgagctcgctgctg
acgcgccgggacgtcgtggtcgtcgcgacggtgtcgtgcatctacgggctgggcacgccg
caggagtacgtcgaccgcatggtgaccctcgcggtcggcgaccggatcgaccgcgaccag
ctgctgcgccagttcgtgacgatgcagtactcgcgcaacgacatggcgttcacgcgcggg
acgttccgcgtgcgcggcgacacgatcgagatcatcccggtctacgaggagctcgcgatc
cgcatcgagatgttcggcgacgagatcgaggcgatcgcgacgctccacccgctcacgggc
gacatcgtgcgggacgagcagcaggtccacgtcttcccggcgacgcactacgtggccggt
cccgagcgcatggagcgcgcgatcaccggcatcgaggccgagctggcggagcgcctggcg
gacctcgagcggcagaacaagctcctcgaggcgcagcggctgcagatgcgcacgacctac
gacatcgagatgatgcggcagatcggctcgtgctcgggcatcgagaactactcgcggcac
atcgacggacgcgcgccggggtccgcgccgcacacgctgatcgactacttccccgaggac
ttcctgctcgtcatcgacgagtcgcacgtgaccgtgccccagatcggcgcgatgtacgag
ggtgaccggtcgcgcaagcgggcgctggtcgaccacgggttccggctgccgagcgcgatc
gacaaccgcccgctgcggtgggaggagttcgtcgagcgcatcgggcagaccgtgtacctg
tcggcgacgcccggggactacgagctgtcgatggcggacggcgtggtggagcagatcatc
cgtccgaccgggctcgtcgaccccgaggtcgtcgtcaagcccacgaaggggcagatcgac
gacctgctgggcgagatccgcacgcgcgtcgagcgcgacgagcgcgtcctggtcacgacg
ctgacgaagaagatgtcggaggacctcaccgactacctcctggagaaggacgtccgggtc
cggtacctgcactccgaggtcgacacgctgcgccgcgtcgagctgctccgcgagctgcgc
ctgggcgagtacgacgtgctcgtcggcatcaacctgctgcgcgagggcctcgacctgccc
gaggtctcgctggtcgcgatcctcgacgccgacaaggagggcttcctgcgctcgggcaag
tcgctgatccagacgatcggccgcgccgcgcgcaacgtctccggccaggtgcacatgtac
gccgacaagatcacccccgccatgcggctcgcgctcgacgagaccgaccgtcgccgcgag
aagcagatcgcgtacaacgtcgagcacggcatcgacccgcagccgctgcgcaagcgcatc
ggcgacatcaccgacatgctcgcgcgcgaggacgccgacaccgccgagctgctcggcggc
ggcggccggcaggcgagccgcggcaaggcgcccgtgcccgggttcgggtcgcgcaacgcg
ccgcacgacgagcgcacgcgcctcaccggcgcggcggcgcacgagctcgccgacctcatc
cagcagctcacggaccagatgcacgccgccgcgggcgagctgcagttcgagctcgcggcg
cggttgcgcgacgagatctcggggctgaagaaggagctgcggcagatgcaggccgccacc
gcctga
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