KEGG   Cellulomonas iranensis: LFM56_08265
Entry
LFM56_08265       CDS       T07886                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
  KO
K03702  excinuclease ABC subunit B
Organism
cira  Cellulomonas iranensis
Pathway
cira03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cira00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    LFM56_08265 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cira03400]
    LFM56_08265 (uvrB)
DNA repair and recombination proteins [BR:cira03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     LFM56_08265 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      LFM56_08265 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD AAA_16 AAA_22 AAA_5 UB2H DUF87 Helicase_RecD nSTAND3 E3_UFM1_ligase AAA_7 AAA_19 SWI2_SNF2 AIG1
Other DBs
NCBI-ProteinID: UCN16275
LinkDB
Position
1844295..1846400
AA seq 701 aa
MRPVTDLQRTVAPFEVVSEYTPSGDQPTAIAELAERVQAGEKDVVLLGATGTGKSATTAW
LIERLQRPTLVMAPNKTLAAQLATEFRELLPNNAVEYFVSYYDYYQPEAYIAQTDTYIEK
DSSINEEVERLRHSATSSLLTRRDVVVVATVSCIYGLGTPQEYVDRMVTLAVGDRIDRDQ
LLRQFVTMQYSRNDMAFTRGTFRVRGDTIEIIPVYEELAIRIEMFGDEIEAIATLHPLTG
DIVRDEQQVHVFPATHYVAGPERMERAITGIEAELAERLADLERQNKLLEAQRLQMRTTY
DIEMMRQIGSCSGIENYSRHIDGRAPGSAPHTLIDYFPEDFLLVIDESHVTVPQIGAMYE
GDRSRKRALVDHGFRLPSAIDNRPLRWEEFVERIGQTVYLSATPGDYELSMADGVVEQII
RPTGLVDPEVVVKPTKGQIDDLLGEIRTRVERDERVLVTTLTKKMSEDLTDYLLEKDVRV
RYLHSEVDTLRRVELLRELRLGEYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSGK
SLIQTIGRAARNVSGQVHMYADKITPAMRLALDETDRRREKQIAYNVEHGIDPQPLRKRI
GDITDMLAREDADTAELLGGGGRQASRGKAPVPGFGSRNAPHDERTRLTGAAAHELADLI
QQLTDQMHAAAGELQFELAARLRDEISGLKKELRQMQAATA
NT seq 2106 nt   +upstreamnt  +downstreamnt
atgcgccccgtgaccgacctgcagcggaccgtcgcgccgttcgaggtggtgtccgagtac
accccgagcggcgaccagccgaccgcgatcgccgagctcgccgagcgcgtgcaggcgggc
gagaaggacgtcgtgctgctcggcgcgaccggcaccggcaagtccgcgaccaccgcgtgg
ctcatcgagcggctgcagcgtcccacgctcgtcatggcgcccaacaagaccctcgccgcg
cagctcgccacggagttccgtgagctgctgccgaacaacgccgtcgagtacttcgtctcg
tactacgactactaccagcccgaggcgtacatcgcgcagacggacacctacatcgagaag
gactcctcgatcaacgaggaggtcgagcggctgcggcactccgcgacgagctcgctgctg
acgcgccgggacgtcgtggtcgtcgcgacggtgtcgtgcatctacgggctgggcacgccg
caggagtacgtcgaccgcatggtgaccctcgcggtcggcgaccggatcgaccgcgaccag
ctgctgcgccagttcgtgacgatgcagtactcgcgcaacgacatggcgttcacgcgcggg
acgttccgcgtgcgcggcgacacgatcgagatcatcccggtctacgaggagctcgcgatc
cgcatcgagatgttcggcgacgagatcgaggcgatcgcgacgctccacccgctcacgggc
gacatcgtgcgggacgagcagcaggtccacgtcttcccggcgacgcactacgtggccggt
cccgagcgcatggagcgcgcgatcaccggcatcgaggccgagctggcggagcgcctggcg
gacctcgagcggcagaacaagctcctcgaggcgcagcggctgcagatgcgcacgacctac
gacatcgagatgatgcggcagatcggctcgtgctcgggcatcgagaactactcgcggcac
atcgacggacgcgcgccggggtccgcgccgcacacgctgatcgactacttccccgaggac
ttcctgctcgtcatcgacgagtcgcacgtgaccgtgccccagatcggcgcgatgtacgag
ggtgaccggtcgcgcaagcgggcgctggtcgaccacgggttccggctgccgagcgcgatc
gacaaccgcccgctgcggtgggaggagttcgtcgagcgcatcgggcagaccgtgtacctg
tcggcgacgcccggggactacgagctgtcgatggcggacggcgtggtggagcagatcatc
cgtccgaccgggctcgtcgaccccgaggtcgtcgtcaagcccacgaaggggcagatcgac
gacctgctgggcgagatccgcacgcgcgtcgagcgcgacgagcgcgtcctggtcacgacg
ctgacgaagaagatgtcggaggacctcaccgactacctcctggagaaggacgtccgggtc
cggtacctgcactccgaggtcgacacgctgcgccgcgtcgagctgctccgcgagctgcgc
ctgggcgagtacgacgtgctcgtcggcatcaacctgctgcgcgagggcctcgacctgccc
gaggtctcgctggtcgcgatcctcgacgccgacaaggagggcttcctgcgctcgggcaag
tcgctgatccagacgatcggccgcgccgcgcgcaacgtctccggccaggtgcacatgtac
gccgacaagatcacccccgccatgcggctcgcgctcgacgagaccgaccgtcgccgcgag
aagcagatcgcgtacaacgtcgagcacggcatcgacccgcagccgctgcgcaagcgcatc
ggcgacatcaccgacatgctcgcgcgcgaggacgccgacaccgccgagctgctcggcggc
ggcggccggcaggcgagccgcggcaaggcgcccgtgcccgggttcgggtcgcgcaacgcg
ccgcacgacgagcgcacgcgcctcaccggcgcggcggcgcacgagctcgccgacctcatc
cagcagctcacggaccagatgcacgccgccgcgggcgagctgcagttcgagctcgcggcg
cggttgcgcgacgagatctcggggctgaagaaggagctgcggcagatgcaggccgccacc
gcctga

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