Cellulomonas iranensis: LFM56_08680
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Entry
LFM56_08680 CDS
T07886
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
cira
Cellulomonas iranensis
Pathway
cira03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cira00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
LFM56_08680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cira03400
]
LFM56_08680
DNA repair and recombination proteins [BR:
cira03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
LFM56_08680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
UL11
Motif
Other DBs
NCBI-ProteinID:
UCN16344
LinkDB
All DBs
Position
1936000..1937100
Genome browser
AA seq
366 aa
AA seq
DB search
MRAIWKGAVAFGLVNVPVRLYAATGEHEVRLHQVHREDGGRIRYRKVCSLDGEQVEWADI
AKGYETEDGELVVLTDEDFDQLPLSTEREIEVLEFVPAEQVDPILLQKTYYLEPDRTAAK
PYALLRGALEQTDRVAVVKVAIRQRESMAVLRVRDKVIVLQTLLWPDEVREADFPVLDDD
VSVRPQELTMASSLVESLAADFDPSQYEDAYVTALEELIAAKVSSGDTQAPATPPEEEGA
SEGGAEVVDLLAALQRSVDKARAARGEDADEGSAGSGSGSDSGSDSGRSSRRTSSTGRGA
TGAAKDRGSTAASSTAKGAAKDAPAKKSAAKAAPAKKTAAKKAPAKKAADAEDAAPARRK
ARSKAS
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
gtgcgggcgatctggaagggcgccgtggccttcggcctggtgaacgtgccggtgcggctg
tacgccgcgacgggggagcacgaggtgcggctgcaccaggtgcaccgcgaggacggtggc
cgcatccgctaccgcaaggtctgcagcctggacggcgagcaggtcgagtgggccgacatc
gcgaaggggtacgagaccgaggacggtgagctggtcgtgctcacggacgaggacttcgac
cagctgccgctgtcgaccgagcgcgagatcgaggtgctggagttcgtgccggccgagcag
gtcgacccgatcctgctgcagaagacgtactacctggagccggaccgcacggcggcgaag
ccgtacgcgctgctgcgcggtgcgctcgagcagacggaccgcgtcgctgtggtgaaggtc
gcgatccggcagcgcgagtcgatggcggtgctgcgcgtgcgggacaaggtcatcgtgctg
cagacgctgctgtggccggacgaggtgcgcgaggccgacttcccggtgctcgacgacgac
gtgagcgtgcgcccgcaggagctgacgatggcgtcgtcgctcgtggagtcgctcgcggcg
gacttcgacccgtcccagtacgaggacgcgtacgtgacggcgctcgaggagctgatcgcg
gcgaaggtgtcgtcgggggacacgcaggcccccgcgaccccgccggaggaggagggcgcg
tccgagggcggggcggaggtcgtggacctgctggcggccctgcagcggtcggtcgacaag
gcgcgcgccgcgcgcggcgaggacgcggacgagggctcggcggggtcgggctcgggttcg
gactcgggttcggactcggggaggtcgtcgaggcggacgtcgtcgacggggcgcggcgcg
acgggcgcggcgaaggaccgcgggagcacggccgcgtcgtccacggcgaagggcgcggcg
aaggacgcgcccgcgaagaagtcggcggcgaaggcggcacccgcgaagaagacggccgcg
aagaaggcacccgcgaagaaggccgccgacgccgaggacgcggcccccgcgcgtcgcaag
gcccgcagcaaggcctcgtga
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