Cellulomonas iranensis: LFM56_09680
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Entry
LFM56_09680 CDS
T07886
Name
(GenBank) HRDC domain-containing protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
cira
Cellulomonas iranensis
Brite
KEGG Orthology (KO) [BR:
cira00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cira03016
]
LFM56_09680
Enzymes [BR:
cira01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
LFM56_09680
Transfer RNA biogenesis [BR:
cira03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
LFM56_09680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
UCN13201
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All DBs
Position
2145643..2146890
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AA seq
415 aa
AA seq
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MEAEVSHEEPEAEPTPPPVVPLLEPADGVPPVVDTPAALAATVAAFAAGTGPVAVDAERA
SGYRYGQRTYLVQLRREDAGTALIDPIALPDLSALSDALVGVEWVLHAASQDLPGLAEQG
MRPSRVFDTELAARLLGMERVGLAAVVADTLGLGLAKEHSAVDWSTRPLPPEWLRYAALD
VEVLVEVRQVLAERLAVSGKAEWARQEFEAVRTAPPPAPRAEPWRRVSGLHTIRDARRLA
VVRELYATRDRNARERDISPGRVLPDAAIVAAAQAMPRTVGQLTALPAFMGKGTRRRAAL
WQGAIDRATALPEAELPATRGPASDGPPPPRAWADRDPAAAARLAAARAVVAELSEQHTV
PVENLLQPDLLRRLCWSPPAPLDAAAVAATLTAGGARAWQVELLADRLATAFATA
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgaggtgtcgcacgaggagcccgaggccgagccgaccccgccgccggtggtc
ccgctgctcgagcccgccgacggcgtgcccccggtcgtcgacacgccggcggcgctggcc
gcgaccgtggcggcgttcgccgccgggacgggcccggtcgcggtcgacgccgagcgcgcg
tcgggctaccgctacggccagcgcacgtacctcgtgcagctgcgacgcgaggacgcgggc
acggcgctgatcgacccgatcgccctgccggacctgtcggcgctgtccgacgcgctcgtg
ggcgtcgagtgggtgctgcacgcggcgtcgcaggacctgccggggctcgccgagcagggc
atgcgaccgtcgcgcgtgttcgacaccgagctcgcggcgcgcctgctgggcatggagcgc
gtcggtctcgcggcggtcgtcgcggacacgctcgggctgggcctggccaaggagcactcg
gcggtcgactggtcgacgcgtccgctgccccccgagtggctgcgctacgcggcgctcgac
gtcgaggtcctcgtcgaggtgcgtcaggtcctggccgagcggctcgccgtctccggcaag
gccgagtgggcacgtcaggagttcgaggccgtgcgcaccgcgcccccgccggcgccgcgc
gccgagccctggcggcgggtgtcgggcctccacacgatccgtgacgcccgccggctcgcg
gtggtgcgcgagctgtacgcgacgcgggaccgcaacgcgcgcgagcgggacatctccccc
ggccgggtgctgcccgacgcggcgatcgtcgccgcggcgcaggcgatgccccgcacggtg
ggccagctgacggccctgccggcgttcatgggcaagggcacgcgtcgacgcgccgcgctg
tggcagggcgcgatcgaccgcgccaccgcgttgcccgaggccgagctgccggcgacgcgc
ggtcccgcgagcgacggcccgccgccgccgcgcgcctgggcggaccgcgaccccgcggcg
gccgcgcgtctcgcggcggcgcgcgcggtggtggccgagctctcggagcagcacacggtg
cccgtcgagaacctgctgcagccggacctgctgcggcggctgtgctggtcgccgccggcc
ccgctcgacgccgcggcggtcgcggcgacgctgacggcgggcggtgcgcgcgcgtggcag
gtcgagctgctcgcggaccggctcgcgacggccttcgccacggcctga
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