Cellulomonas iranensis: LFM56_10285
Help
Entry
LFM56_10285 CDS
T07886
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cira
Cellulomonas iranensis
Pathway
cira03030
DNA replication
cira03430
Mismatch repair
cira03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cira00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LFM56_10285 (dnaE)
03430 Mismatch repair
LFM56_10285 (dnaE)
03440 Homologous recombination
LFM56_10285 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cira03032
]
LFM56_10285 (dnaE)
03400 DNA repair and recombination proteins [BR:
cira03400
]
LFM56_10285 (dnaE)
Enzymes [BR:
cira01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LFM56_10285 (dnaE)
DNA replication proteins [BR:
cira03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LFM56_10285 (dnaE)
DNA repair and recombination proteins [BR:
cira03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LFM56_10285 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
OB_MCM10
DUF655
DNA_pol_IIIA_C
DUF2490
Motif
Other DBs
NCBI-ProteinID:
UCN13313
LinkDB
All DBs
Position
complement(2278082..2281675)
Genome browser
AA seq
1197 aa
AA seq
DB search
MAAGGSPDPSFVHLHVHSEYSMLDGAARIGEMLDEAARLGQQAMAITDHGYLFGAFEFWQ
KATDRGVKPIIGVEAYVTPGTSRFDQNRVRWGEAHQAADDVSARGAYTHMTLLSRTTAGM
HNLFRMGSLASVEGQMGKWPRMDRELLSRYADGLIATTGCPSGEVQTRLRLGHWDEAVRA
AGELQDIFGKEFFYVEVMDHGLDIEKRVIKDLLRVAEAIGAPLVATNDLHYTREEDAHAH
EVLLAVQSGSTLDEPTSDNGGSRFAFGGTGYYVKSAAEMRRTWAELPEACDNTLLIAEQC
DVSFNTGANYMPRFPVPAGENEDSWFVKEVQNGLLRRYSGSIPDAVQKQADYEVGVITQL
GFSGYFLVVADFINWAKAQGIRVGPGRGSAAGSMASYAMGITELDPLEHGLIFERFLNPE
RVSWPDVDVDFDERRRGEVIRYVTEKYGDDRVCQIVTYGTIKAKQALKDASRVLGFPFAM
GEKLTKAMPPPVMGKDIPLSGMYDPEHPRYAEADEFRQVVAADPEAQRVLETARGLENLK
RQWGVHAAGVIMSSEPLLDIIPIMKRPQDGAIITQFDQPASEALGLIKMDFLGLRNLTIL
DDALENIVMNGKEPIAIEEVPLDDRATYELLGRGDTLGVFQLDGGPMRSLLRQMRPDNFE
DVSAVIALYRPGPMGMNSHVNYALRKNGLQEIEPIHPELVEPLEDVVGVTHGLIVYQEQV
QRAAQKLAGYSLGQADLLRRAMGKKKKEVLDKEFVPFQAGMRERGYSDAAIQAVWDVLVP
FAGYAFNKAHSAAYGVVSYWTAYLKANYPTEYMAGLLTSVRDDKDKSALYLGECRHMGIT
VLPPDVNSSSANFTAVGADIRFGLTAVRNVGANVVDAIVAAREEKGAFTSFTDFLDKVPA
VVCNKRTIESLIKAGAFDSLGHARRSLLLIHEQAVDAVIDVKRKEATGQFDLFAELGGDE
ETGSGIAVTIPDLPDWDKKQRLAFEREMLGLYVSDHPLSGLEHVLSAQADVSIATLNADE
ARPDGSTVVVAGLVTSLQRKMSKQGNPWAAVTLEDMEGSVEIMFFGETYLAYSTVLAEDA
VLVIRGRVRRRDDQMQLQAMEVTIPDTSAVADAPVVVSLAESRCTPPVVERLREVLSTHP
GVTEVHLRLTSPGRAVVMRLGDGFRVERSPSLYGDLKALLGPSCLATPGQATVGLAS
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atggctgctggaggatccccggacccgtccttcgtccacctccacgtgcacagcgagtac
tcgatgctcgacggtgccgcccgtatcggcgagatgctcgacgaggccgcgcgcctcggg
cagcaggcgatggcgatcaccgaccacgggtacctgttcggggcgttcgagttctggcag
aaggccaccgaccggggcgtgaagcccatcatcggggtcgaggcgtacgtcacgccgggc
acgagccggttcgaccagaaccgcgtgcggtggggcgaggcgcaccaggccgccgacgac
gtgtcggcgcgcggcgcgtacacgcacatgacgctgctgagccgcaccaccgcgggcatg
cacaacctgttccggatggggtcgctcgcgtccgtcgaggggcagatgggcaagtggccc
cgcatggaccgcgagctgctgtcgcgctacgccgacggcctgatcgcgaccacgggctgc
ccgtcgggcgaggtgcagacgcggctgcgcctgggtcactgggacgaggccgtgcgcgcc
gcgggcgagctgcaggacatcttcggcaaggagttcttctacgtcgaggtcatggaccac
gggctcgacatcgagaagcgcgtcatcaaggacctgctgcgcgtcgccgaggccatcggg
gcgccgctggtcgcgacgaacgacctgcactacacgcgcgaggaggacgcccacgcgcac
gaggtgctgctcgccgtccagtccgggtcgacgctcgacgagccgaccagcgacaacggc
gggtcgcggttcgcgttcggcggcacgggctactacgtgaagtccgcggccgagatgcgc
cgcacgtgggccgagctgcccgaggcgtgcgacaacacgctgctcatcgccgagcagtgc
gacgtgtcgttcaacaccggcgcgaactacatgccgcggttccccgtgcccgcgggggag
aacgaggactcctggttcgtcaaggaggtccagaacggtctgctgcggcgctactccggc
tcgatcccggacgcggtgcagaagcaggccgactacgaggtcggcgtcatcacgcagctc
gggttctcgggctacttcctcgtggtcgcggacttcatcaactgggccaaggcgcagggc
atccgcgtcgggccgggccgtggctcggccgccggctcgatggcgtcgtacgcgatgggc
atcaccgagctcgacccgctcgagcacggcctgatcttcgagcgcttcctcaaccccgag
cgcgtgtcctggcccgacgtcgacgtcgacttcgacgagcgtcggcgcggcgaggtcatc
cggtacgtcaccgagaagtacggcgacgaccgggtctgccagatcgtcacctacggcacc
atcaaggccaagcaggcgctcaaggacgcgtcgcgcgtgctgggcttcccgttcgcgatg
ggggagaagctcaccaaggcgatgccgccgcccgtcatgggcaaggacatcccgctgtcc
ggcatgtacgaccccgagcacccgcggtacgccgaggcggacgagttccgccaggtcgtc
gcggcggaccccgaggcgcagcgcgtgctcgagaccgcgcgcggcctggagaacctcaag
cggcagtggggcgtgcacgcggccggcgtcatcatgtcgagcgagccgctgctcgacatc
atcccgatcatgaagcgcccgcaggacggcgcgatcatcacgcagttcgaccagccggcg
tccgaggcgctcgggctgatcaagatggacttcctgggcctgcgcaacctcacgatcctc
gacgacgcgctcgagaacatcgtgatgaacggcaaggagcccatcgcgatcgaggaggtc
cccctcgacgaccgcgcgacgtacgagctcctgggccgcggcgacaccctgggcgtgttc
cagctcgacggcgggccgatgcggtcgctgctgcggcagatgcgccccgacaacttcgag
gacgtctcggccgtcatcgcgctgtaccgccccggcccgatgggcatgaactcgcacgtg
aactacgcgctgcgcaagaacgggctgcaggagatcgagccgatccaccccgagctcgtc
gagccgctcgaggacgtggtgggcgtcacccacggcctgatcgtctaccaggagcaggtg
cagcgcgccgcgcagaagctcgccgggtactcgctcggccaggccgacctgctgcgccgc
gcgatgggcaagaagaagaaggaggtcctcgacaaggagttcgtgcccttccaggcgggc
atgcgcgagcggggctactccgacgcggcgatccaggcggtgtgggacgtgctcgtcccg
ttcgccgggtacgcgttcaacaaggcgcactccgcggcgtacggcgtcgtgtcgtactgg
acggcctacctcaaggcgaactacccgaccgagtacatggcgggcctgctcacgtcggtg
cgcgacgacaaggacaagtcggcgctgtacctcggcgagtgccgccacatgggcatcacg
gtcctgccgcccgacgtcaactcgtcgtcggcgaacttcacggctgtcggcgccgacatc
cgcttcggcctcaccgcggtccgcaacgtcggcgccaacgtggtcgacgcgatcgtcgcg
gcgcgcgaggagaagggcgcgttcacgtcgttcaccgacttcctcgacaaggtgccggcc
gtcgtgtgcaacaagcggacgatcgagtcgctcatcaaggcgggcgcgttcgactcgctc
gggcacgcgcggcgttcgctgctgctgatccacgagcaggcggtcgacgccgtcatcgac
gtcaagcgcaaggaggcgacgggccagttcgacctgttcgccgagctgggtggcgacgag
gagaccggcagcggcatcgccgtgacgatccccgacctgcccgactgggacaagaagcag
cggctcgcgttcgagcgcgagatgctcggcctgtacgtgtccgaccacccgctgtcgggt
ctcgagcacgtgctgtccgcgcaggccgacgtctcgatcgcgacgctcaacgccgacgag
gcgcgccccgacgggtcgaccgtcgtggtggcggggctcgtgacgagcctgcagcgcaag
atgtccaagcagggcaacccgtgggccgccgtgacgctcgaggacatggagggctcggtc
gagatcatgttcttcggcgagacctacctcgcctactcgaccgtgctcgccgaggacgcg
gtgctcgtgatccgcgggcgcgtgcgacggcgcgacgaccagatgcagctgcaggcgatg
gaggtgacgatccccgacacgtcggccgtggccgacgcgcccgtcgtggtgtcgctcgcc
gagtcgcgctgcacgccgcccgtcgtcgagcggctgcgggaggtgctgtcgacgcacccc
ggcgtgaccgaggtgcacctgcggctcacgagccccggccgcgcggtcgtcatgcggctc
ggcgacgggttccgcgtcgagcgctcgccgtcgctgtacggcgacctcaaggcgctgctc
gggccgagctgcctcgcgacgccggggcaggcgacggtggggctggcctcctag
DBGET
integrated database retrieval system
