Cellulomonas iranensis: LFM56_10700
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Entry
LFM56_10700 CDS
T07886
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cira
Cellulomonas iranensis
Pathway
cira03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cira00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LFM56_10700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cira03019
]
LFM56_10700
03016 Transfer RNA biogenesis [BR:
cira03016
]
LFM56_10700
Enzymes [BR:
cira01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
LFM56_10700
Messenger RNA biogenesis [BR:
cira03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LFM56_10700
Transfer RNA biogenesis [BR:
cira03016
]
Prokaryotic type
tRNA degradation factors
LFM56_10700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
KH_1
S1
KH-I_KHDC4-BBP
RNase_PH_C
KH_PNO1_2nd
KH_2
KH_KhpA-B
Mug135_C
Motif
Other DBs
NCBI-ProteinID:
UCN13389
LinkDB
All DBs
Position
complement(2374449..2376686)
Genome browser
AA seq
745 aa
AA seq
DB search
MEGPEIQFAEAVIDNGRFGTRTVRFETGRIAKQAAGSAVAYLDDDTMLLSATTAGKHPRE
GFDFFPLTVDVEERQYAAGKIPGSFFRREGRPSTDAILACRLIDRPLRPLFVKGLRNEVQ
VVVTVLSINPDDAYDVLAINAASISTQLSGLPFSGPVAATRLALVDGQWVAFPRYSERER
STFDIVVAGRVVGDDVAIAMIEADAPEGAWNLIHGGGGTAPTEEVVAQGLEASKPFIKAL
VEAQQQLAAQAAKETQTFPTFPDYQPDAFAAVEQAASERLSAALQIAGKQERENRLDEIK
AEVVGELAEQFEGREKEISAAYRSLQKQLIRQRILTDGFRIDGRGLRDIRTLSAEVEVLP
RTHGSALFERGETQILGVTTLNMLRMEQQIDSLSPETRKRYMHHYNFPPYSTGETGRVGS
PKRREIGHGALAERAIVPVLPAREDFPYAIRQVSEALGSNGSTSMGSVCAATLSLLNAGV
PLRAPVAGIAMGLVSDTVDGETRYAALTDILGAEDAFGDMDFKVAGTREFVTAIQLDTKL
DGIPASVLAGALTQAKEARLAILDVIAEAIDVPDEMSPFAPRVISVKVPVDKIGEVIGPK
GKMINQIQEETGADISIEDDGTVYIGATDGPSAEAARAAINAIANPHMPEVGERFVGTVV
KTTTFGAFISLSPGKDGLLHISQIRKLVGGKRVENVEDVLKIGQKVQVEIGEIDPRGKLS
LHAVLDEAEAGAQDEAADASATADA
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
gtggagggtcccgagatccagttcgccgaggcagtgatcgacaacggtcgcttcggcacc
cgcaccgtccgcttcgagacgggccgcatcgccaagcaggccgccggctccgccgtggcc
tacctcgacgacgacacgatgctgctgtcggccacgacggccggcaagcacccgcgcgag
ggcttcgacttcttccccctgacggtcgacgtcgaggagcgccagtacgccgcgggcaag
atccccggctcgttcttccgtcgcgagggccgtccctcgaccgacgcgatcctcgcgtgc
cgtctcatcgaccgcccgctgcgccccctgttcgtcaagggcctgcgcaacgaggtccag
gtcgtcgtgacggtcctgtcgatcaaccccgacgacgcgtacgacgtgctcgcgatcaac
gccgcgtcgatctcgacgcagctgtccggcctgccgttctccggccccgtggccgcgacc
cgcctcgcgctggtcgacggccagtgggtcgcgttcccgcgctactccgagcgcgagcgc
tcgacgttcgacatcgtcgtcgcgggccgtgtcgtcggtgacgacgtcgcgatcgccatg
atcgaggccgacgcgcccgagggcgcgtggaacctcatccacggcggcggcggcaccgcg
ccgaccgaggaggtcgtggcgcagggtctcgaggcgtccaagcccttcatcaaggcgctc
gtcgaggcgcagcagcagctcgcggcccaggccgcgaaggagacgcagaccttcccgacg
ttcccggactaccagcccgacgcgttcgccgccgtcgagcaggccgcgtccgagcgcctg
tcggccgcgctgcagatcgccggcaagcaggagcgcgagaaccgcctcgacgagatcaag
gccgaggtcgtcggcgagctcgcggagcagttcgagggtcgcgagaaggagatctccgcc
gcgtaccgctcgctgcagaagcagctcatccgccagcgcatcctcaccgacggcttccgc
atcgacggtcgcggcctgcgggacatccgcacgctctcggccgaggtcgaggtgctgccc
cgcacgcacggctcggcgctgttcgagcgcggcgagacccagatcctcggcgtcacgacg
ctgaacatgctccgcatggagcagcagatcgactcgctctcgcccgagacgcgcaagcgg
tacatgcaccactacaacttcccgccctactcgaccggcgagaccggccgcgtgggctcg
cccaagcgccgcgagatcggccacggcgcgctcgccgagcgcgcgatcgtcccggtcctg
ccggcgcgtgaggacttcccctacgcgatccgccaggtctccgaggcgctgggctcgaac
ggctcgacctcgatgggctcggtctgcgccgcgacgctgtcgctgctcaacgccggtgtc
ccgctgcgtgcgcccgtcgcgggcatcgccatgggcctcgtgtccgacacggtcgacggt
gagacccgctacgcggcgctcaccgacatcctgggcgccgaggacgcgttcggcgacatg
gacttcaaggtcgccggcacgcgcgagttcgtcaccgcgatccagctcgacaccaagctc
gacggcatccccgcctcggtcctggccggcgcgctgacgcaggccaaggaggcgcgcctc
gcgatcctcgacgtcatcgccgaggcgatcgacgtcccggacgagatgagcccgttcgcg
ccccgcgtgatctcggtcaaggtgccggtcgacaagatcggcgaggtcatcggcccgaag
ggcaagatgatcaaccagatccaggaggagaccggcgccgacatctccatcgaggacgac
ggcacggtctacatcggcgccaccgacggtccgtcggcggaggccgcgcgggcggcgatc
aacgcgatcgccaacccgcacatgcccgaggtcggcgagcgcttcgtcggcaccgtggtg
aagacgacgacgttcggcgcgttcatctcgctgtccccgggcaaggacggtctgctgcac
atctcgcagatccgcaagctcgtgggcggcaagcgcgtcgagaacgtcgaggacgtcctc
aagatcggccagaaggtccaggtcgagatcggtgagatcgacccgcgcggcaagctctcg
ctgcacgcggtgctcgacgaggccgaggccggggcccaggacgaggcagcggacgcgtcc
gccaccgccgacgcctga
DBGET
integrated database retrieval system
