Cellulomonas iranensis: LFM56_10905
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Entry
LFM56_10905 CDS
T07886
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
cira
Cellulomonas iranensis
Pathway
cira02024
Quorum sensing
cira03060
Protein export
cira03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
cira00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
LFM56_10905 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LFM56_10905 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LFM56_10905 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
cira02044
]
LFM56_10905 (ffh)
Enzymes [BR:
cira01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
LFM56_10905 (ffh)
Secretion system [BR:
cira02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
LFM56_10905 (ffh)
Eukaryotic Sec-SRP protein
LFM56_10905 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
nSTAND3
CbiA
cobW
ArsA_ATPase
Zeta_toxin
APS_kinase
AAA_30
ParA
AAA_18
AAA_31
AAA_16
AAA_33
AAA_25
NACHT
TsaE
Thymidylate_kin
MobB
Motif
Other DBs
NCBI-ProteinID:
UCN13428
LinkDB
All DBs
Position
complement(2418328..2419944)
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AA seq
538 aa
AA seq
DB search
MFATLSDRLTSTFKNLRAKGRLSEADIDATIREIRRALLDADVAVPVVRQFTGAVRERAL
SAEVSGALNPAQQVVKIVNDELVGILGGQTRTVAFAKQPPTVILLAGLQGAGKTTLAGKL
ALWLREQGHTPLLVAADLQRPNAVTQLQVVGERAGVPVYAPHPGNQGSDDVLPAGADPVA
VARSGLETARQRQHDVLIVDTAGRLGVDAELMSQAADIRDAVDPDEILFVVDAMIGQDAV
TTAQAFADGVGFTGVVLSKLDGDARGGAALSIASVTGRPIMFASTGEKLTDFEVFHPDRM
ASRILDMGDVLTLIEQAEKAFDAEQAEKMAGKLVGGEDFTLEDFLVQMQQLKNMGSLKKM
FGMLPGMGQMREALENFDEREVDRIEAIIRSMTPGERQNPKIINGSRRARIARGSGTTTS
EINQLLERFEGAKKMMRQMARGGGMPGGMPGMGNLPGMGGKKSRGRQAPPKRGKGARSGN
PAKRAEQERAAAARAAGEAPPAPSGSAFGLGGAAPAQDDAAFDPGSLPAGLGDLFKGR
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
ttgttcgccaccctctccgaccgtctcacgtcgacgttcaagaacctgcgcgcgaagggg
cgcctctccgaggcggacatcgacgccacgatccgcgagatccggcgtgcgctgctcgac
gccgacgtcgcggtcccggtggtgcgccagttcacgggcgcggtgcgcgagcgcgcgctg
tcggccgaggtgtccggcgcgctcaaccccgcgcagcaggtcgtcaagatcgtcaacgac
gagctcgtcgggatcctcggcggccagacgcgcacggtcgcgttcgcgaagcagccgccg
accgtcatcctgctcgcgggtctgcagggcgcgggcaagacgacgctcgcgggcaagctc
gcgctgtggctgcgcgagcagggccacacgccgctgctcgtcgcggccgacctgcagcgc
cccaacgcggtgacccagctccaggtcgtcggcgagcgcgcgggtgtgcccgtctacgcg
ccgcaccccggcaaccagggctcggacgacgtgctgccggccggtgcggacccggtggcg
gtcgcgcgctcgggcctcgagaccgcgcgccagcgtcagcacgacgtgctgatcgtcgac
accgcgggtcgtctcggcgtcgacgccgagctcatgtcgcaggccgccgacatccgcgac
gcggtcgaccccgacgagatcctgttcgtcgtcgacgcgatgatcggccaggacgccgtg
acgaccgcgcaggcgttcgccgacggcgtcggcttcaccggtgtcgtgctgtcgaagctc
gacggcgacgcgcgcggcggtgccgcgctgtcgatcgcgagcgtcacgggccgcccgatc
atgttcgcctcgaccggtgagaagctcactgacttcgaggtgttccaccccgaccgcatg
gcgtcgcgcatcctcgacatgggcgacgtcctcacgctcatcgagcaggccgagaaggcg
ttcgacgccgagcaggccgagaagatggccggcaagctcgtcggcggcgaggacttcacg
ctcgaggacttcctcgtgcagatgcagcagctcaagaacatgggctcgctgaagaagatg
ttcgggatgctgccgggcatgggccagatgcgcgaggccctggagaacttcgacgagcgc
gaggtcgaccgcatcgaggcgatcatccgctcgatgacgcccggcgagcggcagaacccc
aagatcatcaacggctcgcggcgcgcgcgcatcgcgcgcggctcgggcaccacgacgagc
gagatcaaccagctgctcgagcggttcgagggcgcgaagaagatgatgcgccagatggcc
cgcggcggcggcatgcccggcggcatgccgggcatgggcaacctgccgggcatgggcggc
aagaagtcgcgcggccggcaggcgccgcccaagcgcggcaagggcgcacggtcgggcaac
cccgcgaagcgggccgagcaggagcgggccgccgcggcgcgcgcggcgggcgaggcgcct
cccgcgccgtccgggtcggcgttcgggctcggcggcgccgccccggcgcaggacgacgcg
gcgttcgacccgggcagcctgcccgcggggctgggcgacctgttcaaggggcgctga
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