Citrus sinensis (Valencia orange): 102578018
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Entry
102578018 CDS
T02983
Symbol
AP1
Name
(RefSeq) APETALA1
KO
K09264
MADS-box transcription factor, plant
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cit03000
]
102578018 (AP1)
Transcription factors [BR:
cit03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, Homeotic genes
102578018 (AP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
K-box
SRF-TF
HOOK_N
Mu-like_Pro
DUF3584
TRIM_CC
PFam54_60
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
102578018
NCBI-ProteinID:
NP_001275828
UniProt:
Q6EEV9
LinkDB
All DBs
Position
4:complement(join(24477364..24477463,24478137..24478255,24478465..24478506,24478929..24478970,24479062..24479161,24479311..24479375,24479767..24479845,24482377..24482561))
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AA seq
243 aa
AA seq
DB search
MGRGRVQLKRIENKINRQVTFSKRRAGFLKKAHEISVLCDAEVAVIIFSHKGKLFEYSTG
SCMEKILERYERYAYAERQLIAPDPESQRNWPLECNNLKAKIDLLQKDQRHYLGEDLESL
SLKDIQQLEQQLDTALKHIRSRKNQLMQESISELQKKEKSIEEQNNLLVKQIKEREKAAA
QQAQWGNQIQNQVPNTLSFLLPQPPPCLRLGGAYQEQASEMRRNELNLTLEPVCSCSLGC
FAG
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgggaagaggtagggttcagctgaagagaatagagaacaagatcaatcgccaagttacc
ttttccaaacggagagctggcttcttgaagaaagctcatgagatctctgtgttatgtgat
gctgaagttgctgttattatcttctctcacaaagggaagctctttgaatactccactgac
tcttgcatggaaaagatactggaacgctatgagaggtacgcctatgctgagagacagctg
attgcccctgatcctgaatcacagcgtaactggcccctggagtgcaacaaccttaaggct
aagatagatcttctgcagaaaaaccaaaggcactatttgggagaagatttagagtctctg
tccctcaaagacatccaacagttggagcaacagctggacaccgctctcaaacacatcaga
tcaagaaaaaatcaactcatgcaagagtccatctctgagcttcagaaaaaagaaaagtct
atagaggagcaaaacaacttgctggtaaagcagattaaggagagagagaaggctgcagcg
caacaagctcagtgggggaatcaaattcaaaaccaggttcccaacacattatcctttcta
cttccacagccacctccttgcttaagacttggcggtgcctaccaggaacaggcatcggag
atgaggaggaacgagcttaacctcacccttgaacccgtatgttcgtgtagccttggatgc
tttgctggatga
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