KEGG   Citrus sinensis (Valencia orange): 102606687
Entry
102606687         CDS       T02983                                 
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like
  KO
K10752  histone-binding protein RBBP4
Organism
cit  Citrus sinensis (Valencia orange)
Pathway
cit03082  ATP-dependent chromatin remodeling
cit03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:cit00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    102606687
   03083 Polycomb repressive complex
    102606687
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cit03036]
    102606687
Chromosome and associated proteins [BR:cit03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     102606687
  Histone modification proteins
   HAT complexes
    HATB complex
     102606687
   HDAC complexes
    Sin3A-HDAC complex
     102606687
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     102606687
    PRC2.2
     102606687
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     102606687
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    102606687
  Chromatin remodeling factors
   NuRD complex
    102606687
   NuRF complex
    102606687
   NuRF complex (fruit fly)
    102606687
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_CDC20-Fz WD40_Prp19 Beta-prop_EML_2 Beta-prop_EIPR1 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st Beta-prop_RIG_2nd Beta-prop_EML WDR55 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st eIF2A Beta-prop_DCAF12 Beta-prop_SPT8 WD40_RFWD3 Beta-prop_WDR35_TULP_N ANAPC4_WD40 Beta-prop_WDR19_1st
Other DBs
NCBI-GeneID: 102606687
NCBI-ProteinID: XP_006466032
LinkDB
Position
7:complement(join(6802928..6803029,6803352..6803451,6803570..6803649,6804093..6804167,6804269..6804380,6804562..6804635,6804771..6804852,6805233..6805458,6805692..6805767,6805956..6806030,6806175..6806240,6806475..6806537,6806668..6806754,6806897..6806960,6807714..6807841))
AA seq 469 aa
MKEGRKGMERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLY
LSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKFKTIIHPGEVNRIRE
LPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSRPDLILTGHQDNAEFALAMCPTE
PYVLSGGKDQSVVLWSVQDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSI
GARGKYLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHC
VDWNPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPDKSSVF
GSSAEDGILNIWDHEKIGEKQDYGELKVPNYPPGLFFRHAGHRDKVVDFHWNASDPWTIV
SVSDDGESTGGGGTLQIWRMIDLIYRPEEEVLAELDKFKSHIFGCDKSC
NT seq 1410 nt   +upstreamnt  +downstreamnt
atgaaggagggacgcaaaggaatggaaagatcggttgatgatagatacacacaatggaag
tccttagttcctgtgctctatgactggctcgccaatcacaacctcgtttggccctctctc
tcttgcagatggggtccacaacttgagcaagctacatacaagaatcgccaacgtctttac
ctttctgaacagacggatggcagtgttccaaatactcttgtaatagcaaactgtgaggtt
gtcaagcctcgagttgcagctgcagagcacatatcacagttcaatgaagaagcacgctca
ccctttgtaaagaaatttaaaacaatcatacatcctggcgaggtgaacagaataagagaa
ctcccacagaacagtaaaatagtagccacacacactgatagtcctgatgtcctcatttgg
gatgttgaggcacaacctaatcgccatgctgtcttaggagctgctgattctcgtccagat
ctgatattgaccggccatcaagataatgctgaatttgctctggccatgtgtccaactgaa
ccctatgtgctctctggaggcaaggatcagtcagtggttttatggagcgtccaagaccat
gtctcggctttggcagcagaaccaggttctgcaaaatctacagcttctggtggtgccaac
tctaaaaatgcttccaagagtggtgggaatggtgataaacctctagagagcccttctatt
ggggcacgaggtaaatacctagggcatgaagacactgttgaagacgttcagttctgtcca
tcaagtgcacaggaattctgcagtgtaggtgatgattcgtgccttatactatgggatgcc
agatctggctctactccagctgtcaaggttgagaaagctcataatgctgatattcattgt
gttgattggaatccccatgatgtgaatctcatattgacggggtctgctgataactctatt
catatgtttgaccgccgaaaactcacttctgatggagttggatcacctattcataaattt
gagggtcatagtgctgctgtcctttgtgtacagtggtctcctgacaagtcatcagtcttt
ggaagttctgcagaggatggaattttaaacatctgggatcatgagaagattggtgagaag
caagattatggtgaattgaaagtacccaattatccacccggcttattcttccgacatgct
ggacatagagacaaagttgttgacttccattggaatgcatctgatccatggacgattgtt
agtgtgtctgacgatggtgaaagtactggaggtggtggcacactacagatatggaggatg
atcgatttgatttaccggcctgaagaagaggttttggctgagcttgacaagttcaaatct
catatttttggttgtgataaaagttgttag

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