Citrus sinensis (Valencia orange): 102606709
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Entry
102606709 CDS
T02983
Name
(RefSeq) uncharacterized protein LOC102606709
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
102606709
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cit03009
]
102606709
Enzymes [BR:
cit01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
102606709
Ribosome biogenesis [BR:
cit03009
]
Eukaryotic type
90S particles
Other 90S particles
102606709
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMG1
DUF3332
Motif
Other DBs
NCBI-GeneID:
102606709
NCBI-ProteinID:
XP_006490120
LinkDB
All DBs
Position
9:join(4109795..4110109,4110239..4110331,4110668..4110812,4110907..4111017,4111095..4111177,4111285..4111342,4111647..4111726)
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AA seq
294 aa
AA seq
DB search
MVRAFKMKGQKRKKKRDEKYDREEEEEEKEEVEEEELNDSGKRAKLEKTSQNDNKKGEED
GQEEKDVVVHEMEGIPIAPSDQNTKRLGVIFVLEKASLEVAKVGKSYQILNSDDHSNFLR
RNNKNPADYRPDIVHQALLSILDSPLTKAGRLQAVYVRTDKGVLFEVKPHVRLPRTYKRF
AGIMLQLLQKLSITAVGKREKLLRVIKNPVTQYLPVNSRKIGFSYSSEKLVKMRNYVASI
SDDDNLVFVVGAMAHGKIDCDYTDDLIAISGYPLSAARCIARICEALEDKWNLL
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggtgagggcttttaagatgaaagggcaaaagaggaagaagaagagagatgaaaaatat
gatagagaagaagaggaggaagaaaaggaagaagtagaagaagaggaattgaacgattca
ggaaagagggctaaattagagaaaacttcacaaaatgataataagaagggagaggaagat
ggacaagaagaaaaagatgtggtcgttcatgaaatggaaggtattccaattgccccaagt
gatcaaaataccaagagactaggtgttatttttgttctcgagaaagcttctcttgaagtt
gctaaagttggaaagagttaccagattttaaattctgatgatcactccaatttcttgcga
aggaataacaaaaatccagctgattacaggcctgacatcgttcatcaggctctcctatca
attttagacagcccactaaccaaggctgggaggttacaagctgtctatgttagaaccgat
aaaggtgttctttttgaagttaaaccacatgttcgtctaccgaggacatataagcgtttt
gctggtatcatgttgcagctgctgcaaaaactaagcataacagctgttggcaagcgtgag
aaattattgcgtgtaatcaagaatcctgtcacccaatatttacctgtaaactccagaaag
ataggtttctcatatagttcagaaaaattggttaagatgaggaattatgtggcttccatc
agtgatgacgacaaccttgtttttgtggttggtgcaatggcacatgggaaaatcgattgt
gattatacagatgatttaatagcaatttctggctatccactgagtgctgcccgttgcatc
gcaaggatttgcgaagctttggaggataagtggaatctgttgtaa
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