KEGG   Citrus sinensis (Valencia orange): 102606724
Entry
102606724         CDS       T02983                                 
Name
(RefSeq) DNA repair protein UVH3 isoform X1
  KO
K10846  DNA excision repair protein ERCC-5
Organism
cit  Citrus sinensis (Valencia orange)
Pathway
cit03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cit00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    102606724
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cit03400]
    102606724
DNA repair and recombination proteins [BR:cit03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     102606724
SSDB
Motif
Pfam: XPG_N XPG_I UBM XPG_I_2
Other DBs
NCBI-GeneID: 102606724
NCBI-ProteinID: XP_006470381
LinkDB
Position
2:complement(join(5074291..5074944,5075623..5076156,5076416..5076500,5077133..5077269,5077639..5077936,5078234..5078319,5079550..5079744,5080193..5082047,5082218..5082402,5083456..5083509,5083618..5083695,5084062..5084179,5084269..5084393,5084517..5084594,5085218..5085332,5085414..5085577,5085716..5085966,5086085..5086172))
AA seq 1699 aa
MGVHGLWDLLAPVGRRVSVETLSGKKLAIDASIWMIQFMKAMRDEKGEMVRNAHLIGFFR
RICKLLYLKTKPVFVFDGGTPALKRRTVIARRRQRENAQAKIRKTAEKLLINHLKTMRLK
ELALDLENQRQIQKRDPEGKKVLSDMENCSERTDGVSASDDKENLDEMLAASIAAEANES
SSKSASKSATANLLEEDGDEDEEIMLPTMGGNVDPAVFAALPPSMQHQLLVRNNDAKGKN
VLSDDLGQADTVGISPESHDGVSKSRDHKMLDEMLAASIAAEEDGSLSNNASASAASLPL
EEEDGDEDEEMILPAMTGNVDPAVLAALPPSMQLDLLVQMREQLMAENRQKYQKVKKAPE
KFSELQIQAYLKTVAFRREIDEVQKAAAGRGVAGVQTSRIASEANREFIFSSSFTGDKQV
LTSSRVEGKKDEQQQIPSEHPVSDSVNNGASIDKSNFSSTDQSNSVTKLGPGESRKSFAD
DVETYLDERGRVRLSKVRAMGIRMTRDLQRNLAMMKEIEQDRPNGNNITGAGSMLTLNET
GTSNAVPSEKSKFIGTSLDDTNESVSSIERNKQSTLKSGISLELSFKDNSENNCDDDDDI
FAHLAAGKPVIFPNSPRAHSSISVSDSDWEEGTTERKGSSLSDDANAGINPPLNLEEGGI
SDESEVEWEEGPSCAPKSSLSFPAESEKTVSNIEEEANLQEAIRRSLLDVCIEKPNYALS
EHNKCENLGENACDGTWLYDRENNMDDPNFLGESVSQQHESICEYVDGLGKLDTVGGINN
SEVIGSLGRELKLYEPRNSDEKEMLINKPFEKDNSYFEQSRQGANDGANDGRSLCSDAPC
EDSGTTMELTEVQLVKGRCLSASAKGDEHLTRDKMCSDDRSHSVDAVFEDSSIAILDEDK
KNNCEAETSVLPGDKKNEIEVEMKHDFTAEPSCRTVGTSDTSIPLVKTSGNASIYDTDIE
QKSAEERTPDTYLKDSKQNTGIFATKAIENVHAEATEKILEEEMQILDHEYMYLGDEQKK
LERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLF
GARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIE
VVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRKRRSSDGDKDVNYAKHSVEGVS
EFDESISQFDEDKQSAEYSQNMKKIFMDKHRNVSKNWHIPSSFPSEAVISAYFCPQVDKS
TESFSWGKPDLFVLRKFCWEKFGWGGDKSNELLVPVLKEYEKRETQLRLEAFYTFNERFA
KIRSKRIKKAVKGITGNQSLLLMDDAGQEVSKSRNKRKNNGLENGSNRSQKAPKKGEESV
SGAQNNMEKSSQSQSRKRKVLEKFVLAEMENPERLTPAGGGRNANNVFRGNRRGKGQRVG
RGRGRGRLCAEQSETSSSDDIGSDDTQEYYSEKFEGQQEVRRSTRSRKPVDYNVDDPEIA
DVGKILSNKESSNEEEAKQDSVHGVTGEASADYSRKKQHRADDPSIDKDYIERGGGFCID
DQEIGQPSVSPCDDPFLEAEITKDYMKMGGGFCHDESETREDQVAAKDPVVTGESPSTCF
DSSDGVHCDVGLGDSTTSSNSKEATNGLENVGRTDTFDTEPNPVVQNATSTDSARNDAGR
ASRGSLTAMTFLRRKRRRS
NT seq 5100 nt   +upstreamnt  +downstreamnt
atgggagtccacggtctctgggacttactcgcccccgttggccgtcgcgtgtccgttgaa
actctctccggcaaaaagcttgccatcgatgcgagcatatggatgatccaatttatgaag
gcgatgagagacgagaagggagagatggtgcggaacgcgcatttgatagggttttttcgt
cgaatttgtaagttattgtatctaaagacaaagccagtgtttgtcttcgacggtggcact
ccggcactcaagcgccgcactgtcattgcccgccgcaggcagcgcgagaacgcccaggct
aagatccgcaaaacagctgagaaactgcttattaatcatctcaagacaatgaggttgaaa
gaactcgcgctggatcttgagaaccaaaggcagatacagaagagagaccctgagggaaag
aaggttttgtcggatatggaaaattgttcggaaagaactgatggggtgtcggcaagtgat
gacaaggaaaatctagatgaaatgttggcagcatctattgcagcggaggctaatgagagt
tcaagtaagagtgcatcaaaatctgccactgcgaatctccttgaggaggatggtgatgaa
gatgaagagataatgttgccaacaatgggtggaaatgttgacccagctgtttttgctgct
ttgcctccatcaatgcagcatcagcttcttgttcggaacaatgacgcaaagggcaagaac
gttttatcggatgatttgggccaagccgatacggtgggcattagtccagaaagtcatgat
ggggtatcaaagagtcgtgatcacaaaatgcttgatgagatgttggcagcatctattgcg
gcagaagaagatggaagtttaagtaacaatgcatctgcatcagctgcttcacttcctttg
gaggaagaggatggtgatgaagatgaagagatgatactgcctgcaatgactggtaatgtt
gatccagccgttttagctgctctgcctccatcaatgcaactcgatctgcttgttcagatg
agagagcaattgatggcagaaaacagacaaaaatatcaaaaagtcaagaaggcccccgag
aaattctctgagctacaaatacaggcttatcttaaaactgttgctttccggcgggagata
gatgaagtgcagaaagctgctgctgggaggggggtagctggtgttcagacttcaagaata
gcatctgaagccaacagagaatttatcttttcatcatcatttactggggacaaacaagtg
cttacatcttccagagtagagggtaaaaaagatgagcaacaacagataccatctgaacac
cctgtttcagattccgtgaataatggtgcatctattgataagtccaatttttcatctact
gatcagtccaattctgtcacaaaattaggcccaggggagtctagaaagagttttgctgat
gatgttgagacatacctggatgagagagggcgtgtgcgactcagtaaagtgagagctatg
gggattcgtatgacccgtgatttgcaaaggaatttggcaatgatgaaagagattgagcaa
gacagaccaaatggaaacaatattacaggtgcagggtctatgcttactttgaacgaaact
ggcacgtcgaatgctgttccttctgagaaaagcaagtttataggaacatcacttgatgat
actaatgaatctgtaagctcgatagagagaaataagcagtctacgttaaaaagtggaatt
tctttagaattgtcatttaaagacaatagcgaaaacaactgtgatgacgatgatgatata
tttgctcatttagctgcaggaaaacctgtaatctttcctaattctccaagggcacattct
tctatttctgtttcagatagtgattgggaggaaggaactactgaaagaaaaggtagtagc
ttatctgatgatgccaatgcaggaattaatccccctcttaatcttgaggaggggggcatc
agcgatgagagtgaagtggaatgggaagaaggaccgtcttgtgctcccaaaagttccttg
tcatttcctgctgagtcagagaaaacagtttctaatattgaagaggaggctaacttgcag
gaggcaatcagaagaagtctcttggatgtatgcattgagaaacctaattatgctttatct
gaacataacaaatgtgaaaatttaggagaaaatgcttgtgatggtacttggttatatgat
agagaaaataatatggatgatccaaattttttgggagaaagtgtctctcagcaacatgaa
tcaatttgtgaatatgttgatggtctgggaaaactggatactgttggtggaataaataac
tcagaagtgattggttctttaggcagagagttgaagttgtatgaaccgcgtaattctgat
gaaaaggagatgctgataaataaaccatttgaaaaggacaattcctactttgaacagtca
aggcaaggcgcaaatgatggtgcaaatgatggaaggtctttgtgtagcgatgcaccgtgt
gaagactcaggtactactatggaactgacagaggtccaattagttaaggggcgttgcctg
agtgcttctgctaagggtgatgagcatcttacccgtgataaaatgtgttctgatgatagg
tctcatagtgttgatgctgtatttgaggactcatccattgccattctagatgaagataag
aaaaataattgtgaagctgaaacatctgttctccctggtgataagaaaaatgaaattgaa
gttgagatgaaacatgatttcacagctgaaccatcatgtcgtacagtggggacaagtgat
acttctatccccttggtgaaaacatctgggaatgcatcgatttacgacactgatattgag
caaaagtccgctgaagaaagaactcctgatacatatttaaaagatagcaaacaaaatacg
ggaatatttgcaactaaggcaattgaaaatgtccatgctgaagccacagagaaaattttg
gaggaggagatgcagattctagatcatgaatatatgtatcttggagatgagcagaaaaag
cttgaacgtaatgcggaatctgtgagcagtgagatgtttgcagagtgtcaggaactgctg
caaatgtttggcttaccctatattattgcacctatggaggcagaagctcaatgtgcttat
atggaacttgcaaaccttgttgatggtgttgtgactgatgattctgatgttttcttgttt
ggggcgcgaagtgtttacaagaatatattcgatgaccgcaaatacgtggagacgtacttc
atgcaggacatcgaaaaggaccttggtctgaccagggaaaagctaattcgcatggcgttg
cttctggggagtgattatactgaagggattagtgggattggtattgtcaatgccattgag
gtagtaaatgcattcccggaggaagatggcctttctaaattccgggagtggattgagtca
ccagatccaaccatcctagggaagtttgatgtacaaacaggagcaagttcaaggaaaaga
cgttcaagtgatggtgacaaagatgttaattacgcaaaacactctgtggaaggtgtctct
gaatttgatgaaagcatttcccaatttgatgaggacaagcaatcagctgagtacagccaa
aatatgaagaagattttcatggataagcatagaaatgtgagcaagaactggcacatacct
tcctcttttccaagtgaagcagttatttcagcatatttctgtccacaagtggataagtct
actgaatctttctcgtggggaaagccagacctctttgttcttcgcaaattttgctgggaa
aaatttgggtggggtggtgacaagtcgaatgagttgctcgtacctgttttgaaggaatat
gagaaacgtgagactcaactgcgactcgaagctttctacactttcaatgaaagatttgca
aaaattcgtagcaagcggattaagaaggctgttaaaggaataactggaaaccaatctcta
ctgctgatggatgatgctgggcaagaagtttccaaaagtagaaataagaggaagaataat
ggtcttgaaaatggcagtaatcgatcacaaaaagctccaaagaaaggggaggaaagtgtg
tctggagctcagaacaatatggaaaaatcatctcagagtcaatctaggaaaaggaaggta
cttgagaagtttgttttggctgagatggagaatccagaaagacttacaccggccggtggc
ggacgaaatgccaataatgtatttcgtggaaatagaagaggtaaaggtcagagagttgga
cgaggaaggggaagaggaaggctttgtgctgaacaatctgaaaccagctccagtgatgat
attggtagtgatgatacccaagaatattattctgagaaatttgaagggcagcaagaagtg
cgaaggtcaacacgttccaggaagcctgtggattacaatgtcgatgacccagaaattgct
gatgttggcaagattttgagtaataaagaatcttctaacgaagaggaagcaaagcaagat
tcggttcatggtgtaactggcgaagcttctgctgactatagcagaaagaaacagcacagg
gcagatgacccttcaattgataaagactatattgaaagaggaggtggattctgcattgat
gatcaggaaattggtcagccgagtgtgagcccgtgtgatgatccttttctcgaggcagaa
atcaccaaagattacatgaaaatgggaggtgggttttgtcacgatgaaagtgagacacgc
gaggaccaagttgctgctaaggacccagttgtcactggggagagtccatctacttgcttt
gattcttcagatggagttcactgtgatgttggattaggtgattcgactaccagttcgaac
tctaaagaagcaacaaatggacttgaaaatgtggggaggacggacacatttgatacagag
ccgaatccggtcgttcaaaatgcaaccagtactgatagtgctaggaacgatgctggtaga
gcctcccgaggatctcttactgctatgactttcttgaggagaaaacgtcgaaggagttga

DBGET integrated database retrieval system