KEGG   Citrus sinensis (Valencia orange): 102606773
Entry
102606773         CDS       T02983                                 
Name
(RefSeq) protein PIR isoform X1
  KO
K05749  cytoplasmic FMR1 interacting protein
Organism
cit  Citrus sinensis (Valencia orange)
Pathway
cit04519  Cadherin signaling
Brite
KEGG Orthology (KO) [BR:cit00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04519 Cadherin signaling
    102606773
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cit03019]
    102606773
Messenger RNA biogenesis [BR:cit03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     102606773
   Factors involved in mRNA localization
    Other mRNA localization factors
     102606773
SSDB
Motif
Pfam: FragX_IP CYRIA-B_Rac1-bd WASH-4_N
Other DBs
NCBI-GeneID: 102606773
NCBI-ProteinID: XP_006478985
LinkDB
Position
3:join(39648769..39648825,39648956..39649028,39649586..39649650,39649745..39649822,39650367..39650486,39650590..39650660,39650843..39650935,39651787..39651856,39652030..39652094,39652329..39652524,39652677..39652828,39653860..39653953,39654344..39654559,39654872..39655083,39656150..39656297,39656999..39657167,39657741..39657817,39658052..39658222,39658881..39658957,39659035..39659137,39660026..39660145,39660245..39660388,39661270..39661419,39661619..39661762,39663393..39663480,39664350..39664477,39664714..39664921,39665342..39665514,39666026..39666232,39666653..39666847)
AA seq 1287 aa
MAAVPVEEAIAALSTFSLEDEQPEVQGPSVLVSTERGATASPIEYSDVNAYRLSLSEDTK
ALNQLNTLIQEGKEMASVLYTYRSCVKALPQLPNSMKHSQADLYLETYQVLDLEMSRLRE
IQRWQASAASKLAADMQRFSRPERRINGPTITHLWSMLKLLDVLVQLDHLKNAKASIPND
FSWYKRTFTQVSVQWQDTDSMREELDDLQIFLSTRWAILLNLHVEMFRVNNVEDILQVLI
VFAVESLELDFALLFPERHILLRVLPVLVVLATSSEKDSESLYKRVKINRLINIFKSDPV
IPAFPDLHLSPAAILKELSMYFQKFSAQTRLLTLPAPHELPPREAQDYQRHYLISNHIGG
IRAEHDDFTIRFASAMNQLLLLKSTDNADIEWCKEVKGNMYDMVIEGFQLLSKWTARIWE
QCAWKFSRPYKDAVPSETNEASASYSDYEKVVRYNYSAEERKALVELVSYIKNIGSMMLR
SDTLVADALWETIHAEVQDFVQNTLATMLRTTFRKKKDLSRILSDMRTLSADWMANNSRP
EAELQSMHHVGEESRGNIFYPRAVAPTAAQVHCLQFLIYEVVSGGNLRKPGGLFGNTGSE
IPVNELKQLESFFYKLSFFLHILDYTATVSTLTDLGFLWFREFYLESSRVIQFPIECSLP
WMLVDHVLESQNAGLLESVMMPFDIYNDSAQQALVVLKQRFLYDEIEAEVDHCFDIFVSR
LCETIFTYYKSWAASELLDPSFLFASDNGEKYSVQPMRLSALFKMTRVKLLGRSINLRSL
IAERMNKVFRENLEFLFDRFESQDLCAIVELEKLLDILKHTHELLSKDLSIDSFRLILNE
MQENISLVSFSSRLASQIWSEMQSDFLPNFILCNTTQRFIRSSKVPLASVQKPSVPYAKP
SFYCGTQDLNSAHQSFARLHSGFFGIPHMFSIVRLLGSRSLPWLIRALLDHMSNKITTLE
PLIMGLQETLPKSIGLLHFDSGVTGCMRLVKEQLNWGTKSELKAEVLHGIKEIGSVLYWM
GLLDIVLREVDTTHFMQTAPWLGFLPGADGQISYHQDGGDSPVVNLFKSATAAIVSNPGC
PNPTSFHTMSKQAEAADLLYKANMNTGSVLEYALAFTSAALDKYCSKWSATPKTGFIDIT
TSKDFYRIYSGLQIGYLEESSQSPSNNHKVLGDSVAWGGCTIIYLLGQQLHFELFDFSYQ
VLNVAEVEAISVPQSQKHPHFGQGWEALIEAMKKARRLNNHVFSMLKARCPLEDKTACAI
KQSGAPLHRIKFENTVSAFETLPQRGV
NT seq 3864 nt   +upstreamnt  +downstreamnt
atggcggcagttcctgttgaagaagcgattgcggctctgtccacattctcattagaggat
gagcaaccggaggtgcaaggaccatcggttttggtctcaacggaaagaggagcaaccgct
agtccaattgagtatagtgatgttaacgcataccgcctctcactctcagaagatacaaag
gctctcaatcagttgaacacccttatccaagaagggaaagagatggcttcagtgctttat
acataccgtagttgtgtgaaagctctgcctcagcttcctaactctatgaagcacagtcaa
gctgacttgtatttagaaacttatcaagttctggacttggaaatgagtcgcttacgtgaa
attcaacgatggcaagcatcagctgcttctaaactagcagctgatatgcagcgtttttct
aggccggaacggcgtattaatggtcccacaataacccatctttggtccatgctaaagtta
cttgatgtgcttgtgcaacttgatcaccttaaaaatgctaaagcgagcattcctaatgat
ttttcttggtataagaggacattcactcaagttagtgtccagtggcaagacacagattca
atgagagaggagttagatgatttacagattttcttaagcacaaggtgggctatcttactg
aacttgcatgttgagatgttcagagtgaacaatgttgaagacatccttcaagttctcata
gtctttgctgtggagtcattggagctggattttgcacttctatttccagagaggcacatt
cttcttcgtgtcttgcctgtacttgttgtcttagcaacatcatcagaaaaagatagtgag
tctctgtataagagggtgaaaatcaacagactgatcaatatatttaagagtgatccagtc
attcccgctttcccagatcttcatctttcaccagctgcaatattgaaagaattatcaatg
tacttccaaaaattctctgcacaaactcgtcttctcactcttccagcacctcatgagctc
ccaccccgtgaggcacaagattatcagagacattacctgatttctaatcacattggagga
atccgtgctgagcatgatgattttacaatccgctttgcctcagccatgaatcagctattg
ctgttgaaatcaacagataatgcagatattgagtggtgcaaagaagttaaaggaaacatg
tatgacatggttattgaaggattccagctcttaagtaaatggactgcacgcatttgggaa
caatgcgcatggaaattttctcgcccatacaaggatgcagttccttcagaaacgaacgaa
gcgtcagcatcctattctgactatgaaaaggtggtacgatataattatagtgctgaagaa
aggaaagcactagttgagcttgttagctacataaagaacattggatcaatgatgttgcgg
tctgacacattagtagctgatgctttatgggaaacaatacatgcagaagtccaagatttt
gtccaaaacacattggccactatgttacggactaccttccgaaagaagaaagatctttca
aggattctttcagatatgaggaccctttcagctgattggatggcaaacaatagcaggcct
gaagcagagctacaatctatgcaccatgttggtgaagaaagcagaggaaatatcttttat
ccaagggcagttgcacccacagctgcacaggtccattgcttgcagttcctcatttatgag
gtggtatctggtggtaatctaaggaagcctgggggactcttcggtaatactgggtctgag
attcctgttaatgaattaaagcagttggaatccttcttttacaagcttagcttcttcttg
catatattggactacacagcgactgtttctactttgacggatcttggtttcttatggttt
agagaattttatctggagtcttctcgtgtaattcagtttccaattgaatgctctcttccc
tggatgctggtggatcatgtgcttgagtcccagaatgcaggtcttctagaaagtgttatg
atgccatttgacatctataatgattcagcgcagcaggcattggttgtattgaaacagcgt
ttcctctatgatgaaatagaggctgaggtggaccattgttttgacatatttgtttcaaga
ttgtgtgagactattttcacatattacaaaagctgggcggcaagtgagctgcttgatcca
tcattcctttttgcctcggacaatggagaaaaatattcagtccagcctatgagattatct
gcactttttaagatgactagagtgaagttacttgggaggagcattaatttaagaagttta
attgctgaacggatgaataaagtatttagagagaaccttgagtttctattcgatcgattt
gagtctcaggatctatgtgccatagtggaattagaaaagctgctggatattttaaagcat
acccatgaattgctttccaaggatctttcaatagattcattcaggctcatcttgaatgaa
atgcaagaaaacatatccctggtgtcattttctagtcgacttgcttctcagatttggtca
gagatgcaaagcgatttcttgccgaattttatcctttgtaatactactcagcgtttcatc
cgatcatcaaaagttcctcttgcttctgttcaaaagccttctgttccctatgccaagcct
agtttctactgcggtactcaagatttgaactctgcacatcaaagctttgcacgtttgcat
agtggattctttggaataccccacatgttttctattgttcggcttcttggatccagatca
ttgccttggcttatccgagcactactagatcatatgtcaaataagataacaacactggaa
ccgttgattatggggttgcaagaaaccttgccaaagtctattggtctactgcattttgat
agtggtgtaacaggttgtatgaggcttgttaaagaacaacttaattggggaacaaagtct
gagctcaaagcagaggttcttcatgggattaaggagattggaagtgtgttatattggatg
gggcttcttgatattgtgttgagagaagtagataccacacatttcatgcaaacggcccct
tggttaggctttcttcctggtgcagacgggcaaatatcctatcaccaagatggtggagac
agccctgttgtcaaccttttcaaatcggctaccgctgcaattgtgtcgaaccccgggtgc
ccaaatccaacatctttccacaccatgtcaaagcaggcagaagctgcagatcttttgtac
aaggccaacatgaatactggaagcgtgctagaatatgcccttgcatttacgagtgctgca
ttggataaatactgtagtaaatggagtgccactcccaagacagggttcattgacatcaca
acttcaaaggatttctatcgcatatattctggtcttcaaattggatatctagaggagtct
tctcaatctccgtctaacaatcacaaagtgcttggtgattcagtggcatggggtggttgt
accataatatacttgcttgggcaacaactacattttgagctttttgatttttcgtatcaa
gttctcaatgttgctgaagtggaagctatatcagtcccacagtcacaaaagcatccccat
tttggccagggatgggaagccctaatagaagcaatgaagaaagcaaggagactgaacaac
catgtattctccatgctgaaagcacgttgtcccctcgaagacaagacagcttgtgctata
aagcaaagtggtgctcccctgcatcggattaagtttgagaatactgtctcggcatttgaa
actctgccacagagaggtgtctga

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