Citrus sinensis (Valencia orange): 102606839
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Entry
102606839 CDS
T02983
Name
(RefSeq) nuclear poly(A) polymerase 1 isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102606839
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cit03019
]
102606839
Enzymes [BR:
cit01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
102606839
Messenger RNA biogenesis [BR:
cit03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
102606839
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Motif
Other DBs
NCBI-GeneID:
102606839
NCBI-ProteinID:
XP_006493030
LinkDB
All DBs
Position
6:complement(join(9835173..9835206,9835514..9835587,9836852..9837802,9837889..9838059,9838426..9838755,9838880..9838942,9839059..9839172,9840913..9841074,9841173..9841235,9841675..9841782,9842028..9842105,9842195..9842293))
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AA seq
748 aa
AA seq
DB search
MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI
VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF
GELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSIL
QNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWA
LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY
HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF
EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP
LYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPN
FVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHAT
MPSSSGEFREGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNLTDSIRGSRNSVEV
SSHNGKVDGPMIGDPRNKGLSFNSSNSKDAEKLAIEKIMSGPYVADQAFPLELDQLEVDL
ELKNQAKDFAGSTQNNSLGSCAVNIAAEATLTSMNGGSSSSALSPNGGLGELEPVELTAP
FSNVIPSAPVPQRKPLIRLNFTSLNKAT
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atggggagcagtaacgggcagcgattgggcattacagagcccatatcgttggcaggacca
acggacgatgatttgatgaggacccgcaagcttgaaaagtacttgcgggatgtgaattta
tatgagagtcaagaagaggctgttagtagagaggaagtgctggggagactagaccagatt
gtgaagatatgggttaagaaaattagccgtgcaaaaggtttgaacgaccaactgcttcaa
gaagcaaatgccaagatatttacctttggttcttatcggcttggggtgcacggtcccggt
gcggatatagacacactttgtgtgggacctaggcatgcaacacgagaagaagacttcttt
ggtgagctacatcaaatgcttacagagatgcctgaagttacagaattgcacccggtgcct
gatgctcatgttccagttatgaaattcaagttcagtggtgtttccattgatcttctttat
gcaagactctctctttgggttattcctgaagacttagatatttcacaagactcaattctg
cagaatgcagatgaacagacagttcgtagtcttaatggttgtagagttactgaccagatt
ttgcgtttggttccaaaaatacagaatttccgcacgacattgagatgcatgagattttgg
gctaagcgtcgtggtgtttattcaaatgttgcggggtttcttggtggtataaactgggca
ttgcttgttgctcggatatgtcaactatatcctaatgcagtgcccagtatgttggtttct
cggttcttcagggtttatactcagtggcgctggccaaatccagtcttgctttgtgccata
gaggaggggtcacttggtcttcaagtttgggatccgagaagaaatccgaaggacaagtat
catttgatgcctataataactccagcttatccttgcatgaattccagctataatgtgtca
acaagtaccttgcggattatgatggatgaatttcagcgaggacatgaaatttgtgaggct
atggaaaaaaatgaagctgatgttgattgggatacactttttgagcctttcacctttttt
gaagcatataaaaattatctacggatagatatctctgcagaaaatgctgatgatttaaga
aattggaaaggttgggttgagtctcggctccgtcagcttacattgaagattgaaaggcat
acttacaatatgcttcagtgccacccgcatccaggtgatttttctgacaaatcaaaacct
ttatattgctcatacttcatgggcttgcagcggaaacaaggagttcctgttggtgaaggt
gaacagtttgatattaggttaactgtgaaggagtttaagcaagctgtcagcatgtacacg
ttacggaagcctggaatgcagattagtgttgctcatgttacacgtaggaacttacctaac
tttgtatttccgggtggggttcgaccttctcgtccttcaaaaggaacttgggatagtagg
cgggctttggaacgtaaggtgtcaagccatactaaaccaggagcagatgatggaaggaag
agaaaacagacggatgataatgtagatactcacttgagaaatgccaagtgccatgccaca
atgccttcctctagtggggaatttcgtgagggtagccctattatgagcacgataagttca
tcttctataaatttacagtttgaacatatggacgcaaatgagttagcgggatcaaataga
gaaaaagttgagaataatttgacagacagcataagaggttctagaaattcagtggaggtt
tcctcgcataatggtaaagtagatggacccatgataggtgatcctcgtaataaaggccta
tcatttaattcatcaaactctaaagatgctgaaaagctggcaattgagaagataatgtct
ggtccatatgttgctgaccaagcttttccactagaacttgatcagcttgaagttgatttg
gaacttaaaaatcaagccaaagattttgcagggagcacacaaaacaactctttggggtct
tgtgcagtaaatatagcagcagaagcaacactaacatcaatgaatggaggcagttcttcc
tctgctttatccccaaatgggggcttaggggagcttgagcctgtggaactgacagcgcct
ttctcaaatgtgatcccttctgcacctgtgccgcagcgtaagccgctaatcaggttgaac
ttcacttccttgaacaaggcgacgtaa
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integrated database retrieval system
