KEGG   Citrus sinensis (Valencia orange): 102606989
Entry
102606989         CDS       T02983                                 
Name
(RefSeq) COMPASS-like H3K4 histone methylase component WDR5A
  KO
K14963  COMPASS component SWD3
Organism
cit  Citrus sinensis (Valencia orange)
Pathway
cit03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:cit00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    102606989
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cit03036]
    102606989
Chromosome and associated proteins [BR:cit03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    ATAC complex
     102606989
    NSL complex
     102606989
   HMT complexes
    COMPASS/SET1 complex
     102606989
    COMPASS/SET1 complex (yeast)
     102606989
    MLL-HCF complex
     102606989
    MLL3/MLL4 complex
     102606989
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     102606989
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd EIF3I Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WDR55 WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_TEP1_C Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_EIPR1 Beta-prop_SPT8 Beta-prop_Nup120_160 Beta-prop_WDR19_1st eIF2A Beta-prop_NWD2_C WD40_like Beta-prop_IFT140_1st Beta-prop_NUP159_NUP214 Beta-prop_DCAF12 Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_WDR35_TULP_N RMC1_N Beta-prop_VPS8 VPS8_N WD_LRWD1 PROPPIN Cytochrom_D1 WDR54 PALB2_WD40 DUF5888
Other DBs
NCBI-GeneID: 102606989
NCBI-ProteinID: XP_006466386
UniProt: A0A067GTM7
LinkDB
Position
7:complement(join(4926092..4926385,4927437..4928108))
AA seq 321 aa
MSSDQSLESFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDS
TPPSPLQKFTGHEQGVSDLAFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFC
VNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGL
CRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTG
HTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTEN
IIASGALDNDRTVKIWTQEKE
NT seq 966 nt   +upstreamnt  +downstreamnt
atgtcatcagaccaatcgttagaatccttcaggccttacaccttaacccaaaccctaaac
ggccacctacgcgccatctcctctgtcaaattctcccacgatggccgcctccttgcctct
tcctccgccgacaaaaccctcctcacctattcgctctccagtatttctaattccgattct
acccctccctctcctctccaaaaattcaccggccacgaacaaggcgtctccgacctcgcc
ttctcctccgactcccgcttcctcgtctcagcctccgacgacaaaaccatccgtctatgg
gacgtccccaccgccacctgtctcaaaaccctaatcggccacaccaattacgtcttctgt
gtcaacttcaaccctcaatccaatatgatcgtctctggcgcttttgacgagactgtcagg
atttgggacgttaagaccggaaaatgtctcaaggttttgcctgcccactccgatcctgtc
accgccgttgactttaatcgcgacggcaccatgattgtcactagcagttatgatggactc
tgtaggatttgggatgccagcaccggacattgtatgaaaacgcttattgatgatgaaaat
cctccagtttcctttgttaagttttcgccaaatggaaagtttattcttgttggaactctc
gataatactttgagactttggaactattcaactggcaaaatcctgaagacatacaccggc
cataccaattcgaagtactgcatatcatccaccttctccgtgacaaatgggaagtatatt
gttagtggttctgaggatagttgtgtgtacttatgggaacttcagtcccggaaagtagtt
cagaaattagaaggtcacacagatcctgtcatatcagtggcatctcaccccacggagaac
attattgcatctggtgcacttgacaatgacaggaccgtgaagatttggactcaggaaaag
gaatga

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