Citrus sinensis (Valencia orange): 102607015
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Entry
102607015 CDS
T02983
Name
(RefSeq) cyclic nucleotide-gated ion channel 1 isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
102607015
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cit04040
]
102607015
Ion channels [BR:
cit04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
102607015
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
DUF6377
S1FA
Motif
Other DBs
NCBI-GeneID:
102607015
NCBI-ProteinID:
XP_006490555
UniProt:
A0A067EY01
LinkDB
All DBs
Position
9:join(1198707..1198708,1198787..1199285,1199519..1199713,1200019..1200302,1201055..1201166,1201274..1201510,1202015..1202530)
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AA seq
614 aa
AA seq
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MSGEGTGRDEAESRSQINQRSSISSPVKIYEMGGIVKLLELSDKNCLLKALVNWNKIIVH
LQGNSGSSIQLFLSMAAVSIDPLFFYIPVVNDNKKCIRLDYKLAVTATGLRSLFDFLYIF
YITPQLLADLVASVNAKHEANNSLKSLMKFWLGSLFVDLPAVFPLPQLVILSIIPRMSGL
KILSGMMLLKYSVLIQFVLRMIRIYPWTLGKLGEATWAIAAFNLLLYVLASHVFGALWYF
SAIERQTECWKKACLFNNTGCTRGSFDCYDSLGNYEFLNEFCPTKPQNTTILDFGIFQHA
LQSGIVEVPDFPQKFLHCFRWGLRNLSCFGQNLQTSSNAWENFFVILVTISGLVLMLFLI
GNIQIYLQTKATRPKEMTLRMQEMNEHMPIQKLSRSVQQQLKIYQRYIWRKPDTIDVESS
LSILPKELRRNIKRELCLDLLKNVKEFKTLDEEVLDALCDCVKPAFYFKHTHIVLEGDPI
YEMLFIVQGKMWIYTSKERTNGSANTSHSRDNSKFISRKDHLADGDFWGEELVAWVLRDR
SLSNIPMSTRSVQALKNVEAFGLMAHDLKHVFIEHQVASSTEFNSNYSVKDAARIIQLAW
RRRYSSRNLLKSVL
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggggaaggtacaggaagagatgaagcagagtcaaggtctcagataaaccagaga
agttcaatttcttctcctgtaaaaatatatgaaatggggggcattgtaaaattactggaa
ctaagtgataaaaattgtttactcaaagctctggttaactggaataaaataatagtccac
ttacaggggaattctgggagctcaattcagctttttctatcgatggctgcagtctcaata
gatcctctgtttttttacattcctgtggtgaatgataataaaaagtgcattagattggac
tataagttggctgttacagctactggtctccgttctctatttgatttcttgtacatattt
tacattactccccagctgcttgctgatcttgttgcttctgttaatgctaaacatgaagca
aataattcactcaaaagtctaatgaaattttggttgggctccttgtttgttgaccttcca
gccgtgtttcctctcccacagctggtgattttgtccatcatcccaagaatgagtggcttg
aaaattttgagtggaatgatgttgttgaaatactccgttcttatccaatttgtgctaagg
atgattagaatctacccatggactttaggaaaacttggtgaagctacatgggccattgca
gcattcaatcttctgctttacgtgcttgcaagtcatgtatttggagccttatggtatttt
tcggccatagaaagacaaactgaatgctggaagaaagcctgcttatttaataacactgga
tgcactcgtggttcttttgactgttatgacagtctaggcaactacgaatttctaaatgaa
ttttgcccgacaaagccacaaaatacaaccatccttgactttggaatattccagcacgct
cttcagtctggtatagtggaggtgcctgattttccacagaaattcttacattgttttcgg
tggggcctgagaaatctcagttgttttggtcagaacctgcaaacaagtagcaatgcttgg
gaaaacttctttgtcatcttggttaccatctctggtttggtgttgatgctctttctcatt
ggaaatatacagatatacctgcagaccaaagctacacgaccaaaggagatgaccttgagg
atgcaagagatgaatgagcacatgcccattcaaaagctctctaggtctgttcaacagcag
cttaagatatatcaacgatacatatggcgaaaacctgatactattgatgtagagagttca
cttagtattcttcccaaagaactcagaaggaatataaagcgtgaactgtgcttagacctg
ctaaagaatgtaaaagagtttaaaacattagacgaagaagtattggatgcactttgtgat
tgtgtaaagccagctttctacttcaagcacactcatattgtcttggagggagacccaatt
tatgagatgctcttcattgtccaaggcaaaatgtggatctatacctccaaggagagaacg
aatggctctgcaaacactagtcatagcagagacaacagtaaatttataagcaggaaggat
cacctggcagatggcgacttttggggagaagaacttgttgcttgggttctacgtgaccgc
tctttatccaatatccctatgtcaaccagaagtgttcaagcgctgaaaaatgttgaagcc
tttggtcttatggcccatgacctgaaacatgtgttcattgagcaccaagttgctagctca
actgaattcaactcaaattattctgtgaaagatgcagctcgtataatacaattagcctgg
cgccgccgttattctagtagaaatctactaaagtctgttctgtga
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