Citrus sinensis (Valencia orange): 102607227
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Entry
102607227 CDS
T02983
Name
(RefSeq) RNA-binding KH domain-containing protein PEPPER
KO
K21444
poly(rC)-binding protein 3/4
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cit03019
]
102607227
Messenger RNA biogenesis [BR:
cit03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
102607227
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
MOEP19
DUF1631
NdhO
Motif
Other DBs
NCBI-GeneID:
102607227
NCBI-ProteinID:
XP_006474274
LinkDB
All DBs
Position
9:complement(join(31766204..31766383,31766700..31766894,31767744..31767998,31768084..31768232,31769406..31769655,31769765..31770136))
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AA seq
466 aa
AA seq
DB search
MATAETTDNGSINLPEPDPQPETATTESPTTESEAPPTIGSENTEHTTESDSALPQSTGP
DAAAVPEEKKWPGWPGHCVFRMIVPVLKVGSIIGRKGELIKKTCEDTRARIKVLDGPVSS
PDRIVLISGKEEPEAPVSPAMDAAVRVFKRVSGLPENDVDAKASGAAFCSVRLLVPSTQA
INLIGKQGSLIKSIQENSGASVRVLSSDEAPFYVTEDERIVEMQGEAAKVLKALEAVVGH
LRKFLVDQGVLPLFEKTYNASISQERQVETWADKSSLHAATQSAISTEYTPSTRRESLFL
EREPQLESRYRLSGISIYGQDPALSTIRSSALGRASGPIVTQITQTMQIPISYAEDIIGV
GGTSIENIRRTSGAIITVQESRGLPDEITVEIKGTSSQVQLAQQLIQEYMNNHKESITSS
YGQIDTGYRPSYPQLGNSSYPSSSLSTQPYGGYGSSGVGGYTSYRL
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgctgaaaccaccgataacggctccattaacctacccgaacccgacccgcaa
cccgaaacagctacgaccgaaagcccgacaacagagtccgaagcgccgccgacgattgga
agcgaaaacacggagcatactactgaatctgactcggctctgcctcagtcgaccggaccc
gacgcggccgccgtcccggaggagaagaagtggcctggatggcctggacactgcgttttt
cggatgattgtaccggttttgaaagtcggtagcattattggacgcaagggtgagctcatt
aagaagacgtgcgaggatactcgtgctcgtattaaagttctcgacggcccggtttcttct
cccgatcgcattgtgctgatatcggggaaggaagagccagaggcgcctgtatcacctgca
atggatgctgcagtaagagtatttaaacgggtctctgggttaccagagaatgatgtcgat
gctaaagcatcgggagctgccttttgttctgttaggctgttggttccatccacacaagca
attaatttgattggaaagcaaggttcgttgatcaagtcgatacaggaaaacagtggtgct
tctgtgcgggtgctttcatcagatgaagcaccgttttatgtcaccgaagatgagaggatc
gtagagatgcagggagaagctgcaaaggtcctcaaagctctagaagcagtagtggggcat
ctgaggaagttcttggttgatcaaggtgttcttcctctttttgaaaagacttacaatgcg
tcaatttctcaagaacgtcaagtggagacttgggcggacaagtcatcgctgcatgctgct
actcaaagtgcaattagcaccgagtatactccatcaacaaggagggaatcgttgtttttg
gaacgtgaacctcaattggagtcccgttataggttatccgggatttcaatctatggacaa
gatccagcactttcgactatacgatcatcggcacttggccgtgctagcggtccaattgtt
acgcagattacacaaacaatgcaaataccaatttcttatgctgaggacatcatcggggtt
ggaggcactagtattgaaaacatccgtcgtactagtggggccatcataaccgtgcaagaa
agcaggggattacctgatgaaatcactgtggaaattaaaggcacctcgtcacaggttcag
ttagcccaacaactgattcaggaatacatgaacaatcacaaagagtcgatcacaagcagc
tacggacagatagacacaggctacaggccttcgtatccccagttggggaactcatcatac
ccatcctcttcactgtcgacacaaccttatggtggctacggctcttcaggtgtaggtggc
tacactagttacaggctttga
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