KEGG   Citrus sinensis (Valencia orange): 102607442
Entry
102607442         CDS       T02983                                 
Name
(RefSeq) nuclear pore complex protein NUP85 isoform X1
  KO
K14304  nuclear pore complex protein Nup85
Organism
cit  Citrus sinensis (Valencia orange)
Pathway
cit03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:cit00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    102607442
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cit03019]
    102607442
   03036 Chromosome and associated proteins [BR:cit03036]
    102607442
Messenger RNA biogenesis [BR:cit03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     102607442
Chromosome and associated proteins [BR:cit03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    102607442
SSDB
Motif
Pfam: Nucleopor_Nup85
Other DBs
NCBI-GeneID: 102607442
NCBI-ProteinID: XP_006476034
UniProt: A0A067GWX7
LinkDB
Position
1:complement(join(3304663..3304860,3305178..3305234,3305554..3305641,3305743..3305813,3305913..3306059,3306256..3306312,3306461..3306562,3306864..3307020,3307153..3307190,3307285..3307395,3307549..3307749,3307856..3307975,3308206..3308262,3308397..3308468,3308812..3308895,3308979..3309089,3309211..3309313,3309554..3309915))
AA seq 711 aa
MSGENQGGAIVPYSEEAKKPVVYPLRHGLKPPISRLGISWSRGNSLRVTVFRQPSEDSEN
EVGGKAVEVRLDGRDGEISDAQWRRIAYGSVSPFALLQSRKNSFASLSKISSTTSPFDAE
WWEYVLEYSKDISSLLGNQTSTTQSLIEDPKEVLKKDPEPSNLKAAWELMESFYADKLSQ
AWLPERLVDWLADYDSLFSSTQETVHSKLVDFQKDLVSLQVIEDEPKYWEVMSSALAVGW
LDIVVKLLRLHGSYQLDQLGNRETENGLVEAVAVLISKMPRMRPELEAGKLGECFKAKPD
FMKAWEKWRAQIAKLECSTFWIQCAHRQTQEGLRNMLQIMLGNTNNLCTLTCHWMELYIA
HFLYIRPFTVGLESMYGLAQKCIQLKPMAASHRLMGLLIGILGENIEVVLAECSKGFGPW
MVTHAIEVLTAGSHQADTLLHEERDNLGGISMEELHRLVYAQVLSSHPLTWQIAPIYLTS
CIKQGMGLLEMLLYKQPVDHNQLLLKNLEICRLYELDSVSSNIMKIAGMYNWKHGKKGSG
VYWLQQARDEARLNRIAQQMFDSVGRSISDENFRQWEGLIQLLGSEPKTAGGLEFLHNYR
DFKKSLLQIRDGKTTDAARQAVESLISLMKNPCTPQRFWLPLLHDSLKLLNWEERPLLNV
LQTNLLLNKLQELSIARLRPDFIEADLPPHALSSVRLALATNLGRTTLEEQ
NT seq 2136 nt   +upstreamnt  +downstreamnt
atgtccggcgaaaatcaaggcggagctatagttccgtactccgaggaggctaagaaacca
gtggtgtacccactgcggcacggcttgaagccgccaatttctcggctcggcatctcctgg
tctcgaggcaactcgctacgcgtcacggttttccgacaaccgtcagaagattctgaaaat
gaagtcggaggaaaggcggtggaggtgaggctcgacggcagagacggagagataagcgac
gctcagtggaggagaatcgcctacggttcggtctctccgtttgctctacttcagagtcgc
aaaaattctttcgccagcttatccaagatttcctccactacgtcaccgtttgatgctgag
tggtgggaatatgtattggagtacagcaaggatataagttcacttcttggtaatcaaacc
tcgacgactcaatccctgattgaagaccctaaagaagtcttaaagaaggatccggagcca
agcaatttgaaggctgcatgggagctgatggaatctttttatgctgacaaactttctcaa
gcatggttacctgaacggcttgttgattggttagctgattatgatagtctcttctctagc
acacaggaaactgtccattcaaaacttgtggattttcagaaggatcttgtcagcttacag
gtaattgaggatgaacccaaatactgggaagtgatgtcatcagcgctagcagttggttgg
cttgatattgtggtaaaactgttgcgcttgcatggatcttatcaactagatcagcttgga
aaccgtgagacggagaatggtctggtggaggcagttgctgtccttatttcaaaaatgcca
cgcatgcgtccggaattggaagctggaaaattaggtgaatgctttaaagctaagcctgat
tttatgaaggcatgggagaaatggcgggcacagatagctaagctggaatgcagtacattc
tggattcagtgtgctcatcgtcagactcaagagggcctgagaaatatgctgcaaatcatg
ctgggaaacaccaataatctttgcactctgacgtgtcactggatggaactgtacattgct
cactttctgtacatcaggccgttcactgtgggtttagaaagcatgtatggcctggctcag
aaatgcattcagttgaaaccaatggctgcttctcatagattaatgggacttctcattggg
attcttggtgaaaatattgaggttgtgttagcagaatgttccaaagggtttggtccttgg
atggttacccatgccatagaggtgttgactgctggaagtcatcaagctgatactcttttg
catgaagagcgtgataacctggggggaattagcatggaggagctccatcgacttgtttat
gctcaagttctatcttctcatccattaacttggcaaatagctccaatttatttgacatca
tgcattaagcaaggcatgggtttgctggagatgttattgtataagcaacctgttgatcat
aatcaattgctgcttaagaacttagagatctgccgcctatatgaacttgacagtgttagt
tcaaacattatgaagattgccggaatgtacaactggaagcatggtaagaaaggttctgga
gtttactggcttcagcaagctcgggatgaggctcgacttaacaggattgctcagcagatg
tttgattctgttggaaggtccatctctgatgaaaacttcaggcaatgggaaggtttaatt
caattgttgggctctgaacctaagactgctggtggtcttgaatttctgcacaactatagg
gatttcaagaaatctcttctgcagattcgtgatgggaaaactactgatgctgctcgccaa
gctgtagagtcacttatttcgcttatgaagaatccgtgtacacctcaacgcttttggctg
cctcttctgcatgattcgttgaaactgcttaattgggaggagagacccctgctaaatgtc
ctgcagacaaatcttttgttgaataaactacaagaattatcaatagcaaggttacgaccg
gacttcattgaagctgacttgccaccccatgcattgagctctgtaagactagcacttgct
acaaatcttggacggactaccttagaggaacagtga

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