Citrus sinensis (Valencia orange): 102607561
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Entry
102607561 CDS
T02983
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102607561
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cit03041
]
102607561
Spliceosome [BR:
cit03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
102607561
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
102607561
NCBI-ProteinID:
XP_006483826
LinkDB
All DBs
Position
4:complement(join(26843298..26843405,26843912..26843987,26844172..26844274,26844442..26844512,26844605..26845497,26845714..26845854,26845982..26846047,26846270..26846272))
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AA seq
486 aa
AA seq
DB search
MATLADSFLADLEELSDNEADVNEEEGGVDATNMEEDIDGDIEDIEALNYDDLDNVSKLQ
KSQRFTDIMQKVEAALQNGSDISNHGMVLEDDPEYQLIVDCNVLSVDIENEIVIIHNFIR
DKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGK
PLPEDVLQKTIDACDRALALDAAKKKVLDFVESRMSYIAPNLSAIVGSAVAAKLMGTAGG
LSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQSTPPPLRMRACRLLAA
KSTLAARVDSTRGDPSGTAGRSFREEIHKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGR
RLRKMKERYAVTDMRKLANRMLFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSVGQSKLA
AKVAKRFKEKSYGSSGATSGLTSSLAFTPVQGIELSNPQAHAHQLGGGTQSTYFSETGTF
SKIKKT
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggcaactcttgctgattccttcctcgctgacctggaagagttatctgacaacgaagct
gatgttaatgaagaggaaggaggagttgatgccacaaacatggaagaagatattgacggt
gacattgaagatatagaagctctgaactatgatgacttggacaatgtttcaaaattgcag
aaatctcagagattcactgatataatgcagaaagttgaagctgcactccagaacggttct
gatatatctaatcatggaatggtattggaggatgatccagagtatcagctaattgtcgat
tgtaatgtattatcagttgacatagagaatgagattgtgattattcataatttcattcgc
gacaagtacagactgaaatttccagagcttgaatctttagtccatcaccccattgattat
gcccgtgttgtgaaaaagatcggcaacgaaatggacttgacgcttgtggatctggagggg
cttttaccctcagccattatcatggtggtgtccgtcacagcatcaactacaagtggcaaa
ccacttccagaagatgtccttcaaaagacaattgatgcatgtgatcgagctcttgcactt
gatgcagcaaagaagaaggtccttgattttgtagaaagcaggatgagctatattgcgccc
aatctatctgcaattgttggcagtgctgttgcagcaaaactcatgggaacggctggtggt
ctctcagcattagctaagatgcctgcttgtaacgttcagcttcttggcgcaaagaaaaag
aatcttgctggtttttctactgcaacatctcaattccgtgtaggttatcttgagcagaca
gagatatttcaaagtacacctccacctctaaggatgcgtgcctgccgactcttggctgca
aaatcaacacttgcagcacgtgttgattctactagaggagatccttctggaactgctggg
aggtctttcagagaagagattcacaagaagattgaaaagtggcaagagcctcctcctgca
aagcaacctaaacctcttccagttcctgattctgagcctaaaaagaagaggggtggtcga
cggttaaggaagatgaaagaaagatatgctgtaacagatatgagaaaactggctaataga
atgctatttggtgtacctgaagaaagttccttaggtgatggattgggagagggttatgga
atgcttggtcaagctgggagtggtaaactccgtgtatcggttggtcagagcaaacttgca
gcaaaagttgccaagaggttcaaggaaaagagttatggtagcagcggtgctacttctgga
cttacgtcaagtctagcatttacacctgtgcagggaattgagctatcaaatcctcaggct
catgcacaccagctcgggggtggaactcaaagtacgtacttctctgagacgggaactttt
tcgaagatcaagaagacctag
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