Citrus sinensis (Valencia orange): 102607563
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Entry
102607563 CDS
T02983
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1
KO
K13103
tuftelin-interacting protein 11
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cit03041
]
102607563
Spliceosome [BR:
cit03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
102607563
Other components
Complex C specific factors
102607563
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Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
T2SSM
Motif
Other DBs
NCBI-GeneID:
102607563
NCBI-ProteinID:
XP_006484701
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All DBs
Position
4:join(21339272..21339527,21339672..21342028)
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AA seq
870 aa
AA seq
DB search
MDEDQEMEKFGMDNDFEGGQWINGEFYYKKRRAKPTQTKDDVLYGVFADDSDEDDDDGYS
SKKRRKDRDFGRKADLTKPVNFVSTGTVMPEQEIDKNVKEENVDMFEDDDSGNRSGVGLG
FGSGNPASASGLGFSASNSKKSDNGVKVSDEACDGDDSFLQTPFGRRIKEEAQRKEKERE
MEKEREKLRSEKRTQGGKGGDIGVGNVVMKMMEKMGWYKGRGLGKDEQGITAPIEARLRP
KNMGMGYNDFKETEAAKLPGLEKLEDKKTAGQQQLKGRNKERLWSKLKVKKKEEYITAEE
LLENKREQVVQKVIDMRGPQVRVLTNLENLDAEEKARENDVPMPELQHNVRLIVDLAEVD
IQKIDKDLNNARETALSLQKEKENLEKTAVEQKQQLDNMETIVNVLGQIEKEHTLGTLTL
VSLANYFSDLHKRFANDYKLCNLASIACSFALPLFIRMFQGWDPLQNPSHKMEVVLMWKN
VLQTDDSQDIWDLSTPYSQLISEVVLPAVRIAGINTWDPRDPEQMLRFLESWEKLLPSSV
LHTILDTVVLPKLTSAVDSWDPRRETVPIHVWVHPWLPLLGHKLEGLFQMIRMKLSNVLD
AWHPSDASAYTILSPWKTVFDSASWEQLMRRYIVPKLQIALQEFQINPLEQKLDQFNWVM
PWASAVPTHLMVDLMERFFFTKWLHVLYHWLNTAPDFEEIHRWYLGWKGLIPEELLANQN
IRAQLNVGLDMMSQAAEGGIVVQPGTVENISYLKAREQRQFEAQQKAAAQAQQAAAAAAG
LGSATQMNGMDGRQMTLKEVIEAYAQQHELLFKPKPGRMHNGQQIYGFGNISIYVDSLNQ
MLYAQKPEGWTPVTLDTLLKMHHNSLTRRR
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagaccaggagatggagaaattcggaatggacaacgacttcgaaggcggccag
tggataaacggggagttctattacaagaaacgcagagcgaagccgacgcaaactaaagac
gacgtcttgtacggcgttttcgccgacgattccgacgaagatgacgacgatggttactcc
tccaaaaagcgaagaaaagaccgcgattttggacgaaaggccgatttgacgaagcccgtt
aattttgtttcaacaggtactgtgatgcctgagcaagagattgataagaatgtgaaagaa
gagaatgttgatatgtttgaagatgatgatagtggaaataggtctggtgtaggtcttggt
tttggatctgggaatcctgcttctgcttcagggttagggttcagtgcgagtaattcgaag
aaaagtgataatggggtgaaagtgagtgatgaggcatgtgatggtgatgatagcttctta
cagactccatttggcaggaggataaaggaagaggcgcagaggaaggagaaggagagggag
atggagaaggagagggagaagttgagatcagagaaaagaactcaaggaggaaaaggtgga
gatattggtgtcggcaacgttgtgatgaaaatgatggagaaaatggggtggtataaagga
cgtggattggggaaggatgagcaagggattacggcaccgattgaagcaaggttgagaccg
aagaatatgggaatgggatacaacgattttaaggagactgaagcagcaaagttgccaggt
ttggagaaattggaagacaagaagactgcagggcagcagcaactgaaagggagaaataag
gagaggctttggtcaaagctgaaggtgaagaagaaggaagagtatattacagcagaggag
ttgttggaaaataaaagagaacaggttgttcagaaagtgattgatatgcgagggccacag
gttagggttttgacaaacttggagaatttggatgctgaagaaaaggcaagggagaatgat
gttccaatgcctgagctgcagcataatgtgaggttgattgtggatctggctgaggttgat
atccagaagattgataaagatttgaataacgcgagggagacagcgttgagcttgcaaaag
gagaaggagaatttggaaaagacagccgtggaacagaaacagcagttggataatatggag
acaattgttaatgtcctgggccaaattgagaaagagcatacattaggaacattaacgttg
gtctcgctcgcaaattatttcagcgacttacataagagatttgctaatgattataagctt
tgtaacttggcctctattgcttgctcatttgccttgcccttgtttataaggatgttccaa
ggttgggatcctctccaaaatccatctcataaaatggaggtggtattgatgtggaagaat
gtgctacaaaccgatgatagtcaagatatatgggatttatcaacgccatattctcagttg
atatcagaagttgttttacctgctgtgagaatagctggcatcaatacctgggatcccaga
gaccctgagcagatgcttagatttttggagtcttgggaaaagttgctgccatcttcagtt
cttcataccatattggatacagtagttttgccaaaattgacaagtgctgtggattcatgg
gacccacgtcgtgaaactgttccaatccatgtttgggttcatccatggctgccattgttg
ggacataaattggagggtttgtttcagatgatacgcatgaagttgagtaatgttcttgat
gcttggcatccaagtgatgcatctgcttacaccattttgtcaccttggaagactgtgttc
gattcagcaagttgggaacagcttatgcgtcgatatatagttccaaagttgcagattgcc
cttcaagaattccaaataaatcctctagaacagaagcttgatcagttcaattgggttatg
ccgtgggcttctgctgttccaactcatcttatggttgatttgatggagagattcttcttc
accaagtggctgcacgttttgtatcattggttaaacacagctccagactttgaagaaatt
catagatggtatttaggttggaaaggacttattccagaggaacttttagcaaatcaaaat
attcgggctcagcttaatgttggtcttgacatgatgtcccaagctgccgaaggtgggatt
gtggtccaacctggtacggtagagaacattagttatcttaaggcccgggagcagagacag
tttgaggcgcagcagaaagcagcagcacaagctcaacaagcagctgctgcagcagcaggc
ctaggtagtgcaacccagatgaatggtatggatgggcgtcaaatgactttgaaagaagtc
attgaggcttatgcccagcaacatgagttgctatttaagcctaaacctggcaggatgcat
aatggtcagcaaatttatggctttggtaacataagtatatatgtggactccctaaatcag
atgttgtatgcccaaaagccagaaggatggactcctgtaacacttgacacattgctgaag
atgcatcataattcattaacaaggagacgttga
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