Citrus sinensis (Valencia orange): 102607573
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Entry
102607573 CDS
T02983
Name
(RefSeq) nuclear pore complex protein NUP96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102607573
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cit03019
]
102607573
03036 Chromosome and associated proteins [BR:
cit03036
]
102607573
Messenger RNA biogenesis [BR:
cit03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102607573
Chromosome and associated proteins [BR:
cit03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
102607573
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
102607573
NCBI-ProteinID:
XP_052300392
LinkDB
All DBs
Position
7:join(14588251..14590809,14590934..14591057,14592172..14592320,14592830..14592927,14593115..14593310)
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AA seq
1041 aa
AA seq
DB search
MGLDARTFASCNNIPQYRKGNISMNAYSLSCEISSENGDSLPVLCSPDYYTEPLLNDLAK
REVIDPGYSSRVPDFTVGRLGYGYVKFLGNTDVRWLDLDQIVKFGRHEIVVYEDESSKPE
VGQGLNKAAEVTLFLQGRYLSLKLKEGDSDDFVKKMKERTERQGARFVSFDPVSGEWKFL
VVHFSRFGLSDEEEDDIMMDDATPVQNSLEMNGGEVSDVDEETQMDLSGPELSHSLPAHL
GLDPLKMKEMRMVMFQEEEEIDDFSGTPSWQQWSLGKEYIRPPLQNTAQRMSQRSSSPLA
RKTPVGLLEYHPGNSDSDSPGMILMAQQDKGMPLKKLKSDGFKLDLKHETPVTGSHSHNI
VDAGLFMGRAFRVGWGPNGILVHSGAPVGSNSRGVISSVINVEKVAIDKVVRDENDKVRK
ELVDFSFDAPLNLHKELNHETEEVEVGSYKLKLQKVVSNSLMLSEICRSYIDIIEAQLDV
PGVSSSARLVLMHQVMVWELIKVLFSERENGGQLRSEGDDNEEEMMQDIKDGPPEFDLEA
LPLIRRAEFSCWLKESVCHRVQEDVSSLDESNYLKHIFLLLTGRQLDSSVELAASRGDVR
LACLLSQAGGSTVSRSDIAHQLDLWRVNGLDFKFIEKDRIRLYELLAGHIHSSLNDVTID
WKRFLGLLMWYQLPPETSLAIVFQTYQHLLEDGKAPLPVPIYVDEGPIDEPIDWSGNERY
DLSYYLMLLHASGESKFGSLKTMFNALSSTYDPLDYHMIWHQREVLAAVGVISSNDLQIL
DMGLVSQLLCQGKCHWAIYVVLHMPRCDDYPYLQATLIREILFQYCESWSSEESQRQFIE
ALGVPSEWLHEAMAVYYNYYGELSKALEHFLECANWQKAHSIFVTSVAHTLFLSANHSDV
WTLATSMESHKSEIENWDLGAGMYIVFYLIRSSLQEENNTMSDLNSLESKNAACKEFLVC
LKESLAVWGARLPTEARVAYSKMAEEICDLLLSDISQGPTRDAQLSCFDTVFSAPIPEDF
RSNHLQDAVSLFTCYLSEIAS
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgggattggatgcgagaacttttgcttcatgtaacaatatacctcaatatagaaaggga
aatatttcaatgaatgcttattcgctgtcttgtgagatttcgagtgagaatggagattcc
ttaccagttctgtgttctcctgattattatacggagcctttgttgaacgatttggctaaa
cgggaagtgattgatccgggttactctagtcgggtacctgatttcacagttggaaggttg
ggttatggatatgttaaatttcttgggaacactgacgtcagatggctagatttggatcaa
attgtgaagtttggtaggcatgagatagttgtttatgaagatgaaagttccaagcctgag
gttggtcagggccttaacaaggcagccgaagtgactttgtttctacaagggagatatttg
agtttaaaactaaaagaaggggattcagatgattttgttaagaaaatgaaagagaggacg
gagaggcaaggagctcggtttgtttcttttgaccctgtgagtggtgaatggaagttcttg
gttgttcatttcagtagatttggtttgagtgatgaggaggaggatgatataatgatggat
gatgctacaccagttcaaaattctttggagatgaatggtggagaggtatctgacgttgat
gaagaaacccaaatggatcttagtggaccggagctttctcattctcttcctgcacatctt
ggacttgaccctttaaagatgaaagaaatgagaatggtgatgtttcaggaagaggaggag
attgatgattttagtggaacaccctcatggcagcaatggtcccttggtaaagaatatata
agacctcctttgcagaatactgctcagagaatgagccaaaggtctagttcacctcttgca
cgaaaaactccagtaggtttgcttgagtaccaccctggtaattctgattcagactctcct
ggaatgattctgatggcccaacaggataagggcatgccactaaagaaattgaaatcagat
gggtttaagctggacctcaagcatgaaactccagttactggaagccattctcacaatata
gtcgatgcaggtttgttcatgggtagggcgtttcgtgtagggtggggaccaaatggcatc
cttgttcacagtggtgcaccagttggtagtaattctcggggggtaatatcatctgtaatc
aatgtagaaaaggttgcaatagacaaagtggtcagagatgaaaatgataaagtgagaaag
gaacttgttgatttttcctttgatgctccattaaatcttcataaggagttgaatcatgaa
acagaagaagttgaagttgggtcctataagctaaagcttcaaaaggttgtgtcaaatagc
ttaatgctttcagaaatttgtcggagctatatagacattattgaggcacagctagatgtg
cctggggtatcttcttctgctcgtttagttttgatgcaccaagtaatggtctgggaattg
ataaaagtactcttttctgaaagggaaaatggtggacaattaagatctgagggcgatgac
aatgaggaagagatgatgcaggatataaaggacggtcctcctgaatttgacctggaggca
cttcctcttattcgaagagcagagttcagttgttggttaaaagaaagtgtttgccaccga
gttcaagaggatgtaagctccttggatgagtccaattatcttaaacacatatttttactc
ctgacaggtcggcagttggattcatctgtggaactggctgcttctagaggggatgtgaga
ctggcttgtttgttaagtcaggctggtggatccacggtgagtcgttctgatattgcacac
cagcttgatctttggagagttaatggactggacttcaagttcattgagaaggataggatt
aggctttatgagctgcttgccggccatattcatagctcgttaaatgatgtaaccattgac
tggaagaggttcctgggattgttgatgtggtatcaactaccacctgaaacttcattggcc
attgtttttcaaacttatcaacaccttcttgaggatggaaaggctccattgccggttcca
atttatgtagacgaaggaccaattgatgagcctattgattggagtggaaatgaacgttat
gacctctcgtattatcttatgctccttcatgccagtggagagagtaaatttggctctcta
aaaaccatgtttaatgccctctcttcaacatatgatccacttgactaccatatgatctgg
catcaacgtgaagtgttagcagctgtgggtgttatcagttctaatgatcttcaaatactt
gacatgggacttgtctctcagcttctatgtcaagggaagtgtcattgggccatctatgtg
gtccttcacatgccccgctgtgatgattatccatatctgcaggctacccttatacgggaa
atcttgttccaatattgtgaatcttggagttcagaagaatcacaacgtcaatttattgag
gccttgggcgttccatcggagtggttgcatgaagcaatggcagtttactacaattactat
ggggaactctcaaaggcccttgaacacttccttgaatgtgcaaattggcaaaaagctcac
tccatttttgtaacttcagtggctcatacattatttttgtcagccaatcactcagatgtg
tggacactcgcaacttccatggagagccacaagtcagaaattgagaattgggacctggga
gctggaatgtacattgtgttttatttaataagaagttcattgcaggaagagaacaatact
atgagtgatctgaattctcttgagagcaaaaatgctgcttgtaaggaattccttgtttgt
ttgaaggagtcattggcagtttggggcgctagattacccactgaggccagagtagcatat
tcaaagatggcagaggagatatgcgacttgcttctatctgatattagccagggtccaacc
cgtgatgctcagctaagctgcttcgatacagtctttagtgctccgataccagaagacttc
cgctcaaatcatttgcaggatgcagtatctctttttacatgttatctgtccgagatagct
tcttag
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integrated database retrieval system
