Citrus sinensis (Valencia orange): 102607604
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Entry
102607604 CDS
T02983
Name
(RefSeq) 25.3 kDa vesicle transport protein
KO
K08517
vesicle transport protein SEC22
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit04130
SNARE interactions in vesicular transport
cit04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
102607604
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
102607604
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cit04131
]
102607604
Membrane trafficking [BR:
cit04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
102607604
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Longin
TMEM237
NodS
Flu_PB2_7th
Motif
Other DBs
NCBI-GeneID:
102607604
NCBI-ProteinID:
XP_006490377
LinkDB
All DBs
Position
9:join(2480322..2480512,2480878..2481041,2481196..2481339,2481441..2481511,2481608..2481706)
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AA seq
222 aa
AA seq
DB search
MVKMTIVGRVSDGLPLARGPRYLNQEHDSFSFYKQQAEFILKEISRGALAPSKMTIRVDH
HSFHYLMENGIGCFITLCDSSYPRKLVFHYLQDLQKEFQKFDISLIDKITRPYSCVKFES
IIGNIRKQYVDTRTQANLSKLNANRGQDLDIVIEHMYQIVERKRQSEISEEILTATRKHV
SSIWGSPRLEVIALKWTPIAIIVAVAAILLWANLVLTDEFIV
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atggttaagatgacaatagttggaagggtgagcgatgggttacctctggcacgagggccc
aggtacctgaatcaagagcatgacagcttctcattttacaagcaacaagctgagttcatt
ctcaaagaaatctcaagaggagccttggccccttcgaagatgaccattcgtgttgatcac
cactcatttcactatctgatggagaatggaatcggctgcttcatcacattgtgtgattct
tcatatccaagaaaacttgttttccattatctacaagacttgcagaaggagttccagaag
tttgatatcagcctcattgacaaaattacaagaccatacagctgtgttaaattcgaaagc
ataattgggaatattaggaagcaatatgttgatacaagaacacaggccaatttatcaaag
ctgaatgctaatcgtggacaagatctagatatagtcattgaacatatgtaccaaattgtt
gaaagaaaacgtcaatcagaaatatctgaagaaatattgacagcaactcgtaaacatgtc
tcctcaatatggggttccccacggctggaggtgattgctctgaaatggacacccatagcg
atcattgttgctgttgcagccattcttctatgggccaacctagtccttacagacgaattt
atagtttaa
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