Citrus sinensis (Valencia orange): 102607635
Help
Entry
102607635 CDS
T02983
Name
(RefSeq) SWI/SNF complex subunit SWI3B
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102607635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cit03021
]
102607635
03036 Chromosome and associated proteins [BR:
cit03036
]
102607635
Transcription machinery [BR:
cit03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
102607635
Chromosome and associated proteins [BR:
cit03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
102607635
PBAF complex
102607635
GBAF(ncBAF) complex
102607635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
SWIRM-assoc_1
Myb_DNA-bind_6
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
102607635
NCBI-ProteinID:
XP_006473852
UniProt:
A0A067H2W4
LinkDB
All DBs
Position
5:complement(join(38662959..38663147,38663224..38663354,38663520..38663649,38663935..38664746,38664840..38664978))
Genome browser
AA seq
466 aa
AA seq
DB search
MAAKSPVKEPPGTSAVNPTTPLAPPPVKPELPSSSEPDVVNVPSYSRWFSFDSISECEVK
FLPEFFDSRSPSKNPRVYRYYRDSIVKHYRENPSRKITFTDVRRTLVGDVGSIRRVFDFL
ETWGLINYFASVKTLKWEDKETKSSAASAESSSALKETSKRLCNGCKTLCTIACFACDKY
DLTLCARCYVRGNHRVGVSSSDFRRVEISEEARSDWTEKETLQLLEAIMHFGDDWRKVAQ
HVSGKSEKDCITHFIKLPFGQEFVCKESDSEDVDNKFFSINNPSDAVSESENVGATSPSK
RMRLTPLADASNPIMAQAAFLSALAGVEIAEVAARAAVTTLSDVDDRASKGSLMRNTRQQ
EAEVASNGDATQNALARASVDASSLIEKEELDVEKAISGIVEVQMKEIQDKIIRFESLDL
QMEEEWKQLEQVKNLLFVDQLSVLFHKSNARKNGDRTEENVKTDVS
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggcggctaaatcgcccgttaaagaacctccgggaacgtccgccgttaaccccaccact
cctcttgcgcctccacccgtcaagcccgagctaccctcttcctccgaacccgacgtcgtt
aacgtccccagctattccaggtggttttcatttgacagcatcagtgaatgtgaggtcaaa
tttcttccggaatttttcgattcgcgttcgccatcgaaaaaccctagggtttacaggtac
tatagggattcaatagtcaagcattatagagagaacccgtcgaggaagattacgtttacc
gacgtgaggaggactcttgtcggcgatgtgggatctattcgaagggtgtttgatttcttg
gagacttggggacttattaattactttgcttctgttaagaccttgaagtgggaagataaa
gagaccaagtcctctgctgcttctgctgaatcctcctccgctcttaaggagacctctaag
aggctctgcaatggttgcaagaccctttgtaccattgcttgttttgcttgtgataagtat
gacttgaccctttgtgcgagatgctatgtccgtggtaaccatcgggtgggtgttagctcg
tctgatttcaggcgggtcgagatcagtgaggaggctagatcggattggacagagaaagaa
actttgcaacttctggaggccattatgcattttggtgatgactggaggaaggttgcacag
catgtcagtggtaaaagtgagaaggactgcatcactcattttatcaagctcccttttggg
caggaatttgtttgtaaagaatcagattcggaggatgtggataataagtttttttctatc
aacaaccctagtgatgctgtaagtgaatcggaaaatgttggcgctacatccccgagtaag
agaatgcgtctcacccctcttgccgatgcaagtaacccaataatggctcaggcagctttc
ctgtcggctttggctggtgtcgagattgctgaagttgctgctcgagcagctgtgacaact
ctgtcagatgtggatgatagagcaagtaaagggagtcttatgagaaatacaagacagcaa
gaagctgaggttgcatccaatggtgatgccacccagaatgcattggcaagagcttctgta
gatgcaagttccttgatcgagaaggaagagttggatgttgagaaagctatatctgggatt
gtggaagtgcagatgaaagagatccaggataagatcattcgatttgagagtttagatttg
caaatggaggaagagtggaaacagttggagcaagtcaagaatttactttttgttgatcag
ctttctgttctatttcataaatctaatgctcggaaaaatggagaccggactgaggagaat
gttaaaacagatgtttcatga
DBGET
integrated database retrieval system
