Citrus sinensis (Valencia orange): 102607644
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Entry
102607644 CDS
T02983
Name
(RefSeq) deoxyribodipyrimidine photo-lyase isoform X1
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cit03400
]
102607644
Enzymes [BR:
cit01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
102607644
DNA repair and recombination proteins [BR:
cit03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
102607644
Prokaryotic type
102607644
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
102607644
NCBI-ProteinID:
XP_006477285
LinkDB
All DBs
Position
3:complement(join(6258213..6258386,6258487..6258558,6258643..6258724,6259186..6259244,6259450..6259486,6259615..6259799,6260034..6260274,6260350..6260690,6260901..6261215))
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AA seq
501 aa
AA seq
DB search
MASLTPPSTAVQPGRIRVLKQGSLDKKRGPVVYWMFRDQRVRDNWALIHAVDQANKNNVP
VAVAFNLFDQFLGAKARQLGFMLRGLRLLQRNIEETFQILFFLFQGEAEDNIPNFVRECG
ASLLVTDFSPLREIRRCKDKICNRVSDSVTIHEVDAHNVVPVWVASEKLEYSAKTLRGKI
NKLLPEYLIDYPMLEQPIEKWTGTRQSIDWDSIIAAVLRKGAEVPEIGWCESGEDAAMEV
LKGSKDGFLTKRLKNYPTDRNNPLKPRALSGLSPYLHFGQISAQRCALEARKARKLCPEL
LYLPATLKAIDTFLEELIVRRELADNFCFYQPNYDSLKGAWEWARKSLKDHASDKREHIY
TKEQFEKAQTADPLWNASQMEMVYNGKMHGFMRMYWAKKILEWTTGPEEALAIAIYLNDK
YEIDGRDPNGYVGCMWSICGVHDQGWKERPVFGKIRYMNYSGCKRKFDVDGYIAYVKRIV
GGTKKRRADSLVSGKEKELCG
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggcatctctgactccaccatcaaccgccgttcagccgggcaggattcgggttttgaaa
caaggatcattggataaaaaaaggggcccggtcgtttactggatgttcagggatcaacgg
gtgagggataactgggctttgatccacgctgttgatcaggcaaacaagaacaatgttccc
gtagctgtggcttttaatctttttgatcagttcttgggtgctaaagccagacagctagga
tttatgttaaggggcttgcgtcttcttcagagaaacatagaagaaacgtttcaaatcctt
tttttcttgtttcagggagaagctgaagacaacatacccaactttgtgagagaatgtgga
gcttcattgttagttactgatttctctcctttgcgtgaaattcggagatgtaaagataag
atttgcaacagggtgagtgattcagtgaccattcatgaagttgatgcgcacaatgtagta
ccagtttgggtggcgtctgagaagttggagtacagtgctaagactctaaggggaaagatc
aataaactgcttcctgagtacctcattgattaccctatgttggagcaaccaattgaaaaa
tggactggcactaggcagtcaattgattgggatagcattattgctgctgtcttgaggaaa
ggtgccgaagttcctgaaatcggatggtgtgaatccggagaagatgcagcaatggaagtg
ttgaagggaagtaaagatgggttcctaacaaaaaggttgaagaattatcctacagatcga
aataacccattgaaaccccgagcactttctggtctctcaccatatctgcattttgggcag
atatcggctcagaggtgtgccctggaggcacgtaaggcaaggaaactatgtcctgagctt
ttgtatctacctgcaactctgaaggcaattgatacatttttggaagagttgatcgtgcgt
agagaacttgcagataacttttgcttctaccagcctaattatgattctttaaagggggcc
tgggaatgggctcgtaagagcttgaaggatcatgcctctgataaaagagaacatatttac
acgaaggagcaatttgagaaggcacagacagctgaccctctctggaatgcttctcagatg
gagatggtctacaatgggaagatgcacggttttatgcggatgtattgggcaaagaagata
cttgagtggacaacaggacctgaagaagcccttgcaatagccatatatctgaatgacaag
tacgaaatagatgggagggatcctaatggatatgttggttgcatgtggtcaatatgtggc
gttcacgatcagggctggaaagagcggccagtttttgggaaaatacgttacatgaactac
tcagggtgcaaaaggaaattcgatgttgatggatatattgcttatgtcaagaggatagtg
ggtggaaccaagaagagaagagcggacagtctggtcagtggaaaggaaaaggaactctgt
ggttaa
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