Citrus sinensis (Valencia orange): 102607906
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Entry
102607906 CDS
T02983
Name
(RefSeq) polypyrimidine tract-binding protein homolog 2 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cit03041
]
102607906
Spliceosome [BR:
cit03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
102607906
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_8
RRM_5
DUF4523
Motif
Other DBs
NCBI-GeneID:
102607906
NCBI-ProteinID:
XP_024958668
LinkDB
All DBs
Position
9:complement(join(1261660..1262019,1262110..1262222,1262355..1262436,1262533..1262637,1263169..1263226,1263435..1263530,1263952..1264025,1264115..1264177,1265276..1265485,1265579..1265764))
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AA seq
448 aa
AA seq
DB search
MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI
EFADLNQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVAGNVLLVTIEGT
DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYL
LPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLE
PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAK
EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPM
VGATANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMGNHPYMPPGSMPMGPG
MMQMHMPGQSGMQHHHGAMPPPRPDHMQ
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggcatctgtgtctagtcaaccgcagttccggtacactcaacccccatctaaggtgctc
catttgagaaacttaccatgggaatgcacagaggaggagttaattgaacttggtaagccc
tttggtaaggttgtgaacactaagtgcaatgttggagccaatcggaatcaggcttttata
gaatttgccgatttgaatcaagctattgcaatgatatcatattatgcctcatcttctgag
cctgcccaagtgcgggggaagactgtctacctgcagtattctaataggcaggaaattgtg
aataacaaaacaacagcagatgttgctggaaatgtactattggtaactattgagggtacg
gacgcacggcttgtgagcattgatgttctacatctggtcttttcagcatttggttttgtg
cataagataactaccttcgagaagacagctggttttcaggcattggtgcaattttctgat
acagaaactgcctcttctgcaaaaaatgccctggatggaagaagcatccctaggtatctt
cttccagaaaatatggggccgtgtaccctaaggattacatattctgctcacacagacttg
agtgtgaaatttcagagccaccgtagcagggactacactaatccttaccttcctgttgct
ccatcggccatagatgctagcggccagttgagcgttggtcttgatggaaagaaactagaa
cctgagagcaatgtacttcttgcatctattgagaacatgcagtatgctgtcaccttggat
gttttacacatggtcttttctgcttttggtcctgtccaaaagattgcgatgtttgataag
aatggtggacttcaggctttgattcaataccctgatgttcagacagctgttgttgcgaag
gaagctttggaaggacactgtatctatgatggggggttttgcaagcttcacatatcatac
tctcgccatactgatcttagtattaaggtcaataatgataggagcagagattatacgctc
cctagcactcccatggtgaactcgcaaccttcaattcttggacaacagccggttccaatg
gttggtgccactgctaatcaatacaatggggcgcagtttgctcctccgcctccggagcag
cctatgatgcatcagcctactgcagccggatggggagctgttccaccagcttcacaatcc
atgcccatgatgggcaatcatccctacatgcctccaggttctatgcctatgggccccgga
atgatgcagatgcacatgccaggccagagtggcatgcagcatcatcacggggcaatgccc
ccaccgagacctgatcacatgcaatag
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