Citrus sinensis (Valencia orange): 102608043
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Entry
102608043 CDS
T02983
Name
(RefSeq) uncharacterized protein LOC102608043
KO
K03504
DNA polymerase delta subunit 3
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit03030
DNA replication
cit03410
Base excision repair
cit03420
Nucleotide excision repair
cit03430
Mismatch repair
cit03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
102608043
03410 Base excision repair
102608043
03420 Nucleotide excision repair
102608043
03430 Mismatch repair
102608043
03440 Homologous recombination
102608043
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cit01009
]
102608043
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cit03032
]
102608043
03400 DNA repair and recombination proteins [BR:
cit03400
]
102608043
Protein phosphatases and associated proteins [BR:
cit01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102608043
DNA replication proteins [BR:
cit03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
102608043
DNA repair and recombination proteins [BR:
cit03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
102608043
MMR (mismatch excision repair)
DNA polymerase delta complex
102608043
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDC27
Motif
Other DBs
NCBI-GeneID:
102608043
NCBI-ProteinID:
XP_006477862
LinkDB
All DBs
Position
3:complement(join(12555325..12555463,12556650..12556773,12556895..12557377,12557561..12557958,12558597..12558756,12559051..12559175,12559266..12559321,12560130..12560198))
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AA seq
517 aa
AA seq
DB search
MPEIETLGILDEIQALVSDHLQVVSYKWLSRNFLVSSNTAKRLLQEFVVKHGNGLEVVYT
LSGWLKSSPPSYNIRLVSEPKLAEAKQEFDGNCSIQVYSVQACIPKDPAALWNAEFVQAE
ELFKQPSAVDNCLRDNRFCGISNSFVKRGAEGTPVSNASLQLKIAAIPDLTKTNTAHHNN
TVPPCLQNKVQQSSPKVGLMSSNVVKVVKGQSNGTGAHDQVTKPSVHEEKLQPLPANIQN
ESSSGNGGSLANLWGRASSKSKPNSAPADASAGVVQDVSNEDDAEDVNFRRASNGEGKRK
RKVVFDLSDEDEYEDAVNLASPDLPKGQSSLAPEQSKKVLVTEKPNLIFDELIEDKPKVK
EEKATDLEPNHSEDSSVVSTRTITETSITEKIQKCVPEKDVHKDKVADSSAQSPKRRKVV
KTRIDERGREVTEVLWEGEESEMKKPDSGTTQKADNTMKKAESNTVADNVKRPAAAKKSP
ALGSNAPSNAGNKAGNKKAGNQKDPKQGNILSFFKRV
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaaatcgaaaccctaggtattctcgacgagattcaggctctcgtctctgatcat
cttcaagtggtttcatataagtggctgagtcgcaattttttggtgtcttcaaataccgca
aagaggctgcttcaagagtttgttgtgaaacatggaaatgggttggaagtagtatacact
ttatccggctggttgaagagtagtcctccaagttataatataaggcttgtttctgagcct
aaacttgcagaagccaagcaagaatttgatggcaattgctcaattcaggtctatagtgtg
caagcttgtatcccaaaggatccggcagcactttggaatgctgaatttgtacaagccgaa
gagctcttcaagcagccttcagcagttgataactgcttgagagataataggttctgtggg
atttcaaattcctttgtcaagcgcggtgctgagggaactcctgtaagcaatgcttctttg
cagcttaaaattgcagcgatcccagacctgacaaaaactaacactgcacatcataacaat
acagttccaccatgtttgcaaaataaagttcagcaatcaagcccaaaggtgggtctgatg
tcatccaatgtggtaaaagtggtcaaaggtcaaagtaatggcacaggagctcatgatcaa
gttaccaagccttctgttcatgaagaaaaactacagcctttgcctgcaaatatacagaat
gaaagctcttctggtaatggaggttcattagcaaatttatggggtcgtgcatcttcaaag
tcgaagcccaatagcgcaccagcagatgctagtgcgggagtggtgcaggatgtgagcaat
gaagatgatgctgaagatgtaaattttagaagagcctccaatggggaaggcaaaaggaaa
agaaaggtagtttttgatctctcagatgaagatgagtatgaagatgcagtcaatttggca
tcacctgatctaccaaagggacagtcaagtctagctccagagcaaagtaaaaaagtttta
gttactgaaaaacccaatttgatttttgatgagctaatagaagataaaccaaaagtaaag
gaagagaaagcaactgatctggaacccaaccattcagaagactcttcagttgtcagcaca
agaacaatcactgaaacttccattacagagaagattcagaagtgtgttcctgagaaggat
gtacataaggataaagtggctgattcttcagcccaatcacccaaaagaagaaaagttgtg
aagacacggatcgatgaacgtgggagagaagtaactgaagttttatgggagggtgaggaa
agtgaaatgaagaaacctgacagtggaacgacgcagaaagcggacaatacgatgaagaaa
gctgagagcaatactgtcgccgacaatgttaaaaggccggcggcagctaaaaagtctcca
gcattaggaagcaatgcaccgtctaatgcagggaataaagcaggaaacaagaaagctgga
aatcagaaggatcctaaacaaggcaacattctatctttctttaagagggtatga
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integrated database retrieval system
