Citrus sinensis (Valencia orange): 102608108
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Entry
102608108 CDS
T02983
Name
(RefSeq) autophagy-related protein 18A-like
KO
K22991
WD repeat-containing protein 45
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cit04131
]
102608108
Membrane trafficking [BR:
cit04131
]
Autophagy
Other autophagy associated proteins
Others
102608108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WDR55
Beta-prop_Vps41
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
BCAS3_WD40
CPSF_A
Beta-prop_HPS5
Beta-prop_IFT122_1st
Beta-prop_IFT80_2nd
DUF1513
eIF2A
Motif
Other DBs
NCBI-GeneID:
102608108
NCBI-ProteinID:
XP_006472072
LinkDB
All DBs
Position
5:join(28886262..28886909,28887334..28887547,28887696..28887822,28887926..28888016)
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AA seq
359 aa
AA seq
DB search
MNQPDPITIHHLALNQDHGCFATGTETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLF
RSNIICLVNSGPHQSNKVMIWDDHENRYLGELSFRSEVKNVRLRRDRIVVVLNQKVYVYN
FTDLKLVDQIETVVNPTGLCDVSQNAGPMVMACPGLLKGQVRVEDYGTKKSKYITAHASR
IASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSNAQWLAA
SSDKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFSSEWSM
AQFRLPENVQYLVGFGRQNNTIVIVGLDGSYYKCGFDPMKGGEMHQLEHYNFLKPEEPF
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaacccgacccgataaccatccaccacctcgcgctcaaccaagaccacggctgc
ttcgccacgggcacggaaacgggcttccgggtctacttatccgacccgtacaaacccatc
atgcgccgggacttcgaccggaacccacgtggcgggacccaactggtgtccatgctcttc
cggtcaaacatcatctgcctagtcaactccgggccccaccagagcaacaaggtgatgata
tgggacgaccacgagaaccgctacctcggtgagctgtcgttccggtcggaggtcaagaac
gtcaggctacggcgcgaccggatcgtcgtcgttttgaaccagaaggtctacgtgtacaac
ttcaccgacttgaagctggtcgatcagattgagacagtagtgaatcccacggggctgtgc
gacgtgtcgcagaacgcggggcccatggtgatggcgtgtccggggttgcttaagggtcaa
gttagggttgaggattatgggaccaagaaatcaaagtacataacggcccatgcctcgaga
attgcgagtatcgctatgactttggatggtagattcgtggctactgccagtagtaaggga
actttgattcgggtttttaataccatggatggttcactattgcaagagatgaggagagga
gcagagagagcagagatatacagcttggcattctcttcaaatgcacaatggctagctgct
tcaagtgataaagggactgtacatgtctttggcctcaaggttgattcaggatcaccgggc
accagtaaattgcactcggcttctgagccaaatctttcaagcaaaaactcatcagccatt
tcatcttttagattcatccgaggtgtattgcctaagtatttcagctcagagtggtcaatg
gctcagttccgattgccagaaaatgtgcagtacctagtcggctttggcaggcagaacaac
acaattgtgattgttggcttggatggaagttactataaatgcgggtttgatccaatgaaa
ggcggtgagatgcatcaacttgaacattacaatttcctcaaacctgaagaacccttttag
DBGET
integrated database retrieval system
