KEGG   Citrus sinensis (Valencia orange): 102608510
Entry
102608510         CDS       T02983                                 
Name
(RefSeq) DNA-directed RNA polymerase III subunit 2 isoform X2
  KO
K03021  DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6]
Organism
cit  Citrus sinensis (Valencia orange)
Pathway
cit03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:cit00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    102608510
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cit03021]
    102608510
Enzymes [BR:cit01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     102608510
Transcription machinery [BR:cit03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Core subunits
     102608510
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_2 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_5 Pox_LP_H2
Other DBs
NCBI-GeneID: 102608510
NCBI-ProteinID: XP_024949825
LinkDB
Position
5:complement(join(14786800..14786850,14787041..14787169,14789536..14789639,14789717..14789801,14790360..14790430,14790583..14790638,14790739..14790864,14791994..14792124,14792223..14792358,14792437..14792561,14792771..14792861,14792985..14793124,14793194..14793271,14794442..14794486,14794572..14794703,14794800..14794880,14794959..14795063,14795995..14796075,14796207..14796323,14797067..14797183,14797324..14797434,14797534..14797635,14798843..14798935,14799073..14799132,14802316..14802414,14802497..14802547,14802771..14802809,14803063..14803122,14804356..14804466,14804633..14804738,14805573..14805637,14806375..14806427,14806535..14806625,14806698..14806770,14806949..14807010))
AA seq 1058 aa
MTVDGVSEKLNPHMCRLSDMTYAAPILVNIEYVQGSHTEKTTMEKNDVVIGRIPIMLRSC
RCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVLLIQEQLSKNRVIIDTDKKGNINASV
TSSTETVKSKTVIQMEKGKMYLLLNQFVKKIPIMVVMKAMGMESDQEVVQMVGRDPRYSA
LLLPSIEECANLDIYTQEKALEYLEGKVKRSTFGSPPNDREGRAFSILRDVFLANVPVHN
NNFRPKCFYVAVMLRRMVEAMLNKDAMDDKDYVGNKRLELSGQLVSLLFEDLFKTMISEV
QKTVDIILSKPSRSSRFDLSQFIVRDSITVGLERTLSTGNFDVKRFKMHRKGMTQVLARL
SFIGTLGHMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVT
TDEEEGPLISLCYCLGVEDLELLSGEELHNPNSFLVIFNGLILGKHRRPKCFADVMRKLR
RAGKIGEFVSVFVNEKQRCVYIASDGGRVCRPLVIADKGISRIKEHHMKELSDGVRSFDD
FLREGLIEYLDVNEENNALIALYEGDATPDTTHIEIEPFTILGVIAGLIPYPHHNQSPRN
TYQCAMGKQAMGNIAFNQLCRMDSLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAV
MSYSGYDIEDAIVMNKSSLDRGFGRCIVVKKYTAINQKYANSTSDRILRPDRTGPGAERM
QILDDDGLAAPGEIIKPNDVYINKESPLETRGSIMSPTGQTDSRYRSARQTYKGPDGETC
VVDRVALCSDKNGDLCIKFLIRHTRRPELGDKFSSRHGQKGVCGTIVQQEDFPFSERGIC
PDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGEPSGHADTVESISETLVKH
GFSYNGKDMIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGR
ARNGGLRVGEMERDCLIAYGASMLIFERLMVSSDPFEVQVCRVCGLLGYYNHKLKAGICS
TCKNGDNISSMKLPYACKLLIQELQSMNIVPRLKLAEA
NT seq 3177 nt   +upstreamnt  +downstreamnt
atgactgtggatggtgttagtgaaaaacttaatcctcacatgtgccgcttatctgatatg
acctatgctgcgcctatattggtcaatattgaatatgttcaaggaagtcataccgaaaag
accaccatggagaagaatgatgttgtcattggaagaattcccatcatgttgcggagttgt
cgctgtgtcttatatggaaaggatgaagctgagctggcaagacttggtgagtgccctctt
gatcctggtggatatttcatcattaaaggaactgagaaggtgctattaatacaagaacaa
ctttcgaagaacagagtaattattgacactgacaagaagggcaatataaatgcatctgtt
acaagtagcacagagacggtgaaaagcaaaacagttatccaaatggagaaggggaagatg
tatttacttcttaatcaatttgtgaaaaagattcctatcatggttgtaatgaaggctatg
gggatggaaagtgatcaagaggttgttcagatggttggaagagatcctcgatatagtgcc
ttacttttgccttcaattgaggaatgtgcaaacctggatatatatacacaagagaaagcg
ttggagtatcttgagggaaaggtgaaaaggtctacatttggtagtccaccaaacgatagg
gaaggaagagctttttctattcttcgagatgtgtttcttgccaatgtccctgtgcataac
aataacttccgtccaaaatgtttttatgttgcggtcatgttgagaagaatggtggaggca
atgttaaataaggatgcaatggatgacaaggattatgtggggaataaacggctggagtta
tcaggccaattagtttcattgctttttgaggatttgttcaagacaatgattagtgaggtt
cagaagacagtagatatcatcctatcaaagcctagccggtctagccgatttgatctttct
caatttatagttagagacagtatcactgttggtcttgaaaggaccctttctactggcaac
tttgacgtcaagcggttcaaaatgcaccggaaaggcatgacgcaggtgctggctaggcta
tcattcattgggactctgggccacatgactagagtatcgccacaatttgaaaaatctagg
aaagtaagtggacctagagcattgcaacccagccagtggggtatgctttgtccatgtgat
actccagaaggtgaagcttgtggactggttaaaaaccttgctcttatgactcatgtcaca
actgatgaagaggaaggtccattaatttctttgtgctattgtttgggagttgaggatttg
gaacttctctctggagaagagcttcacaatccaaattcatttctggttatatttaatggg
cttattcttggcaagcataggaggcctaagtgttttgctgatgtaatgagaaagctgcgt
agagctggcaaaattggcgagtttgttagtgtctttgtaaatgagaagcagcgttgtgtt
tacattgcttctgatggaggccgtgtttgtcgtccacttgtcattgctgacaagggcata
tcaaggatcaaagaacaccatatgaaggagttgtcggatggagtccgcagctttgatgac
tttttacgtgagggattgatcgagtatctcgatgttaatgaggaaaataatgctctgata
gctttatatgaaggagatgctacacctgatacaacccatattgagatagagcctttcaca
atcctaggtgttattgctgggctaatcccatatcctcatcataatcaatcaccaagaaat
acctatcagtgtgcaatggggaagcaagctatgggaaatatagcatttaatcaattgtgc
cggatggactcattgctttaccttttggtgtatcctcaacggcctttactgacaacaagg
acaatcgaactggtcggatatgacaagcttggagcagggcagaatgcaactgttgctgtg
atgagttatagtggctatgacatagaggatgcaatagtcatgaacaaatcatctctagat
cgtggttttggtcgctgtattgttgtgaaaaagtatacagccatcaatcagaagtatgca
aatagtacatcggacaggatactaaggccagatagaacaggtcctggtgctgaaaggatg
cagattttggatgatgatggacttgctgctcctggggaaattattaaaccgaatgatgtt
tatatcaataaagagtcccctttggaaaccagaggttcaatcatgtctccaacaggacaa
acagatagtagatataggtccgccagacaaacttacaagggtccggacggggagacctgt
gtagtggatagagttgctctttgttctgataagaatggcgatttatgtatcaagttttta
attcgccatactcgtagaccagagcttggtgataagttcagtagcagacatgggcagaaa
ggtgtctgtggaaccatagttcagcaggaagattttccattttctgaacgtggcatttgt
cctgatttgatcatgaatcctcatggatttccaagtcggatgacagtaggtaaaatgatc
gagcttttagggggaaaggctggagtttcgtgtggtaggttccattatggaagtgccttt
ggagaaccaagtggccatgcagacacagttgaatctataagtgaaacacttgtgaagcat
ggctttagctacaatggcaaggacatgatttattcaggtatcactggatgccctctgcag
gcttacattttcatggggccaatttactaccagaagttaaagcatatggtcctggataaa
atgcatgctcgaggaagtggaccccgtgtcatgctaactcgacaacccactgaagggaga
gcacggaatggaggacttcgagttggagaaatggaacgtgattgtttgattgcttatgga
gctagcatgttgatttttgagcgcctaatggtttccagtgatccttttgaagttcaggtt
tgtagagtgtgtggtctgttgggctattacaaccataagctgaaagctgggatttgttct
acttgtaaaaatggcgataatatttctagcatgaaactgccatatgcatgcaagctcctg
atccaggaactccaatcaatgaatattgttcctcgcttgaaactggccgaggcatga

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