Citrus sinensis (Valencia orange): 102608760
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Entry
102608760 CDS
T02983
Name
(RefSeq) phytochrome E isoform X1
KO
K12123
phytochrome E
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
102608760
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Gene cluster
GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
PAS_4
HisKA
HATPase_c
PAS_9
PAS_3
Motif
Other DBs
NCBI-GeneID:
102608760
NCBI-ProteinID:
XP_006467541
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Position
2:complement(join(31393550..31393763,31394290..31394583,31395042..31395849,31396183..31398238))
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AA seq
1123 aa
AA seq
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MGLQGNRETTNSIGGGHNTTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGK
SFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEML
DLRSRSEDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFY
AILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVE
DVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVR
MICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS
MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCD
MLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDC
TGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHK
DNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNT
QQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMG
KSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDY
KNNVKGVCFVGQDITHEKVLMNKFIRLQGDYDAIIQSVNPLIPPIFASDENACCSEWNAA
MEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNR
QGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIR
QEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGNMELK
SEEFLLGNILDAVVSQVMVLLRDKNLHLLHDIPEEIKALSLNGDRIRLQLVLSDFLHCVV
RHAPSPDGWVEIKVLPGLKLIKDADQFVHVQFRLTHPGEGIPSHLIEDMYNGRNQWTTPE
GLGLKLSRKLLIMMNGRVRYVRENSKCYFVIDLELKTRGRQKM
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgggacttcaaggcaacagagaaacaacaaactcaataggaggaggacacaacacaact
cctttcaaatcttcggatgctaaaatgaagcctgtcaacaaaggcaagacgattattgat
cactacaatgcagatgccggtcttttagctgagttcgagcaatctgttgcgtctggtaag
tcatttaactattcaagatcagttattagtcctccagaaggtgttcccgaggaacaaata
actgcttacttatcaaaaatccaaaggggcggtcttattcagccctttggttgtatgctg
gctgttgaagagcccacttttagaataattggttatagtgaaaattgcttagaaatgtta
gatttgagatcacgaagtgaagattttgagttgaacggtttaatcggaattgacgcaaga
accctttttactcctccttctggggcttctttggctaaagcagctgcttctagagagatt
tcactgctaaacccaattttggttcattctaattctaggagtatcgagaaaccattttat
gctatactgcatagaattgatgtgggaattgtaattgatttagagccttcaaagtcaggt
gatcctgcattgtctcttgctggggccgtgcagtctcagaaactagctgttagtgcaatt
tctaggttacaggcactccctgggggggacatcggtctcttgtgtgataccgttgtggag
gatgtgcagaagctcactggttatgatagagttatgctgtacaatttccatgatgatgat
catggtgaagttgtgtctgaaattagaaggtctgatttggaaccttatttgggaatacac
tttccagccaatgatatccctcaagcagctcgtttcttgttcaagcagaatcgtgttagg
atgatttgtgattgccatgccattcctgttatggtcattcagagtaaagaattaaagcag
cctctttgtttggtcaattcaaccctacggtcgccccatggctgccacttgcaatacatg
actaatatggggtctattgcctcattggtgatggcggttatcatcaatagtaaggattct
atgaagctatgggggctggtggtgtgccaccacacatctccacgctacatccctttccct
cttcgctatgcttgtgaatttcttgtgcaggcattcagcctgcagctatacatggagctt
caggtggcaatgcagttggcagagaagaatattctgaggacacaagttttattgtgtgac
atgctcctcagggatgccccattcagtattgttactcaatctcctagtatcatggatctt
gtgaagtgtgatggggctgcattatattatggtgggagatgctggctggtgggggtaact
ccaactgaatcacagttaaaagatattgcatggtggcttctcaataatcatggggattgt
acagggttgagtactgatagtttggcagaggctggttaccccggtgctgctttattgggt
caggcggtttgtggtatggctactgccagaatcacttcaaaggatttcttattctggttc
agatctcacacagcaaaagaagttaaatggggaggagctaagcatcacccagagcataag
gataacggtggcaaaatgcatccaagatcatcgtttaaagctttccttgaagtggtgaaa
aataggagttttccttgggaagtttcggaaatcaatgctattcactctttgcaaattgta
atgagagattcatttcaggagatggaggaagaaaatgactccaaggttcaaggtaatacc
cagcagaatggcagtaagatgcagggtgtggatgagctcagttcagtggcatgtgaaatg
gttagattgattgagacagcgacagctccaatttttggagttgattcatctggtaccatc
aatgggtggaatgcaaaagttgccgaattgacaggattaccagctagtgaagccatgggg
aaatctctaattgatgaagtagttcatgaggaatctcagggagctgttgaaaatcttatc
tgccgagctctgcttggtgaggaggacaaaaatgttgaattaaaactgagaaagtttgag
cttcaaaagcaacactcagttgtttatattctagttaatgcctgcacaagtagggattac
aagaataatgtcaaaggggtgtgcttcgtgggtcaagacatcacacatgagaaagttctt
atgaataaattcatccgcttgcaaggggattatgacgctatcatacaaagtgttaatcca
ttgattccaccaatatttgcttctgatgagaatgcatgctgttctgaatggaatgctgcc
atggaaaaggtgactggttggatgagacatgaggtgataggtaaaatgcttccaagggaa
atctttggaaatttctgtcgaatgaaaggtcaggatatgctcactaaatttatgattcta
ttgtatcaaggaattactggtcaaggtacagagaacttcccttttggatttttcaataga
caaggacagtttgttgaggtggccttaactgcaagtagaaggactgatgcagaggggaaa
gtaattggctgcttctgcttcatgcagattcttgtgccagacctgcagccagccttagaa
gcccagggcctagaggatatggatatctatgcaaaaattaaggagctggcttatatacgg
caagaggtgaaaaatccgttaaatggtattagatttgttcacaaactcttagaaagttca
tctatttcagaaaatcaaaggcaatatcttgagactagtgatgcatgtgaaagacaaatc
atgacaattattgacggtatggatttgagatgcatagaggaaggcaacatggagctaaaa
tcggaggaattccttctgggtaatatcttggatgctgttgttagtcaagtcatggtcttg
ttgagggataagaatttgcatcttctccatgacattccagaggaaatcaaagcactatca
ctaaatggtgatcgaattaggcttcagctggttctgtcagattttttgcattgtgtggtg
cgccatgcaccttctccagatggctgggtagaaattaaggttttgcctggtctgaagctg
ataaaggatgccgaccaatttgttcatgtacagttcagactgactcatcctggtgaaggc
attccctctcatcttattgaagatatgtataatggtagaaatcagtggactacaccggag
ggtttagggttgaaactgtctcgaaaacttctcatcatgatgaatggccgagtccgctat
gtcagagaaaatagcaagtgttatttcgtcatcgaccttgaactcaaaactagaggaaga
caaaagatgtaa
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