KEGG   Citrus sinensis (Valencia orange): 102608982
Entry
102608982         CDS       T02983                                 
Name
(RefSeq) UBP1-associated protein 2C-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
cit  Citrus sinensis (Valencia orange)
Pathway
cit03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cit00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102608982
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cit03019]
    102608982
   03041 Spliceosome [BR:cit03041]
    102608982
Messenger RNA biogenesis [BR:cit03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     102608982
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     102608982
Spliceosome [BR:cit03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    102608982
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_Nup35 Cut8 Nup35_RRM_2
Other DBs
NCBI-GeneID: 102608982
NCBI-ProteinID: XP_006492883
LinkDB
Position
6:complement(join(19166261..19166605,19167012..19167087,19167227..19167423,19167737..19167880,19168087..19168207,19168674..19168825))
AA seq 344 aa
MEDVKKRKMEDDNILINGQDFNSSSSSSQDHLRSLLDPLSKSQLVDLLSRLGSQYPSIAE
EIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFIT
YKHMESTQSALRAPSKLIDGRLAVCNLACEGLSGVSAVPDLAQRKLYIGGLSPEVTTEVL
LNFFGRHGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAVDDPHKTLGGRTIIVKLAD
THKGKPPQTQLPAAVVPVPLPLGAGYPQAGKAHANTPPVGYSYPQNVPPYPTSSYTSPNT
APVPYPTQPPISYPPIPLKKDPIGPIGHPATAPVGMGGYPFYKH
NT seq 1035 nt   +upstreamnt  +downstreamnt
atggaggatgtgaagaagaggaagatggaggatgataatattttaatcaacggccaagat
tttaattcatcttcatcgtcatcacaagatcacctgcgttctttactcgaccctctttcc
aagtcccagctcgtcgatctcctctctagactagggtcccaatatccttcaattgcagaa
gaaataaaaagtgtcgccagtgcagatccagttcatcgaaagctttttgttcgtggctta
gcttggaataccacttcggaaaccttgtgtgctgcatttcgagtgcatggtgaaatagaa
gaaggagctgtcatctatgacaaagcaacaggaaaatcacgtggctatggtttcataaca
tacaagcacatggagtcaacccagagtgcgctaagagcacctagcaagttgattgacggt
cggttggctgtctgtaatttagcttgtgagggattaagtggggtgagtgctgtgcctgat
ttagcacagaggaagctctacattgggggcctgtcaccagaagtaacaactgaggtgctg
ctgaacttctttggaagacatggtgagattgaggaaggttcagttgcatatgacaaggac
acaaatgaatcacgtggatttggctttgttacatacaaaacagtcgaggcagcaaagaaa
gccgtagatgatccacacaagactcttgggggaaggactatcattgtgaagcttgctgat
acccacaagggcaagccaccgcaaacacaattacccgcagctgtggttccagtgccttta
cctttgggagccggatatccacaggctggaaaagcacatgctaacactccccctgttggc
tactcatacccacaaaacgtaccaccatatcccacttcttcttacacaagtcctaataca
gcacctgtgccgtatcctacgcaacctccaatttcttatccaccgattcccttaaagaaa
gaccctattggtcccattggacatccagcaactgctcctgtaggaatgggtggataccca
ttttacaaacattaa

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