Citrus sinensis (Valencia orange): 102609372
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Entry
102609372 CDS
T02983
Name
(RefSeq) nuclear transcription factor Y subunit C-9
KO
K08066
nuclear transcription factor Y, gamma
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cit03000
]
102609372
Transcription factors [BR:
cit03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
102609372
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Histone
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
102609372
NCBI-ProteinID:
XP_052298019
LinkDB
All DBs
Position
5:join(27206285..27206424,27206726..27206772,27207785..27208605)
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AA seq
335 aa
AA seq
DB search
MVIKLKGKTVKYRTEEHPPTATIKGEQQRQNSKKTHSAFVVSCPKFRGFNLGEGGKSKRI
RKARVYCSSWISMDRQGHGGQPTSMGLVGSGAQVPYGTNPYQQNQMAGGPNPGPAVTSVG
AIQSTSQPGGAQLAQHQLAYQQIHHQQQQQLQQQLQSFWANQYQEIEKVNDFKNHSLPLA
RIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAIT
RTDIFDFLVDIVPREDLKDEVLASIPRGTLPVGGPPDMPPYCYMPTQHASQVGSAGLIMG
KPVMDPAIYAQQPHPYMGQQMWPQGADQQQSPSDH
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggtaattaaactgaagggcaaaacagtcaaataccgaacagaagaacacccaccaaca
gcaacaataaaaggggaacagcaacgtcagaattcgaagaaaacacactcagcttttgtt
gtttcgtgtcccaagttcaggggtttcaatctgggtgaaggaggaaaaagcaaaagaatc
agaaaagctcgtgtatattgttctagttggattagtatggatcggcaaggacacggtgga
caacccacatctatggggttggttggtagtggagctcaagtgccatacggcacaaacccg
tatcagcagaatcaaatggctggcggtcccaaccctggcccagctgtcacatcagtcggg
gcaattcaatctactagtcagccaggaggtgctcagcttgcacaacaccaacttgcctat
caacaaattcatcaccagcagcaacagcagcttcagcaacaactccagtctttttgggcc
aatcagtaccaagaaattgaaaaggttaatgatttcaagaatcatagccttcctttagca
aggatcaagaaaatcatgaaggccgatgaggatgtgagaatgatatcagctgaggcacct
gttatatttgcaagggcatgtgaaatgttcatcttggaattgacgctgcgttcctggaac
cacactgaagagaacaagaggaggacactccaaaagaatgacattgcggcagcaatcact
aggactgatatatttgatttcttggttgacattgtgcctagggaggacctgaaagatgaa
gtacttgcatcaatcccgagaggaaccctgcctgttgggggacctcctgatatgccgcca
tattgctatatgccaactcagcatgcttcccaggttggatccgctgggctgatcatgggt
aagcctgttatggaccctgcaatttacgcccaacaacctcatccctatatgggtcaacag
atgtggccgcagggagcagaccaacagcagtctccttcagaccattag
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