Citrus sinensis (Valencia orange): 102609426
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Entry
102609426 CDS
T02983
Name
(RefSeq) probable pectate lyase 1 isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit00040
Pentose and glucuronate interconversions
cit01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
102609426
Enzymes [BR:
cit01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
102609426
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Ldl_recept_a
Motif
Other DBs
NCBI-GeneID:
102609426
NCBI-ProteinID:
XP_052290433
LinkDB
All DBs
Position
9:join(20184390..20184496,20184890..20184934,20185531..20185605,20186665..20187307,20187412..20187515,20187645..20187783,20187884..20188108)
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AA seq
445 aa
AA seq
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MAVTQRGICLCFAVVLMLFVGVLASVRNEQDVSVSRKMKAESSMNSTMAAKAEVVAEALS
KHAVDNPDEIASMVEMSTRNSTERRKLGYFSCGTGNPIDDCWRCDGNWHKNRKRLADCGI
GFGRNAIGGRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELI
VNSFKTIDGRGANVHIANGGCITIQFVTNVIIHGLHVHDCKPTGNAMVRSSPTHYGWRTV
ADGDAISIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITISNNHMTHHNEVMLLGHSDSY
TRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNR
YNAPLNAFAKEVTKRVDTAASQWKGWNWRSEGDLLLNGAYFTPSGAGASASYARASSLGA
KSSSMVGSITSGAGALTCRKSRQCS
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgacgcagcgtggcatttgtctctgttttgctgtcgttttgatgttgttcgtc
ggcgttctggcttctgtacgtaacgaacaagacgtctctgtttccaggaagatgaaggca
gagagctcaatgaactcaacaatggcggccaaagctgaagtagtagccgaggccttgagt
aaacatgcagttgataacccagatgaaattgcttcaatggttgagatgagcacccgcaac
agcactgaaaggagaaagttggggtacttctcctgtggtactggtaatcccattgatgac
tgctggcgctgtgacggcaactggcacaagaaccgcaagcgtcttgcagactgtgggatt
ggttttggaagaaatgccattggtggccgtgatggtcgcttctatgttgtcactgaccca
agggatgatgaccctgttaaccccaaacctggaactttacgccatgctgttatccaggat
aagcctctctggattgttttcaagagggacatggtgattcaattgaaacaggaactgatt
gtcaatagcttcaagaccattgatggtcgtggggcgaatgtgcacattgctaatggaggt
tgcatcactatccaatttgtgaccaatgtgatcattcacggtcttcacgttcatgactgt
aaacccactggtaatgccatggttaggagctcaccgactcactatgggtggaggacagtg
gctgatggtgatgccatatcaatttttggctctagccatatatggattgatcacaattca
ctctcccattgtgctgatggacttgttgatgccgtcatgggatctactgccattaccatt
tcaaacaatcacatgacccaccacaatgaggttatgctgctgggtcacagtgattcctac
accagagacaagcaaatgcaagtaaccattgcttacaaccattttggagagggactcatt
cagagaatgccaaggtgtagacatggttatttccatgtggtgaacaatgactacactcac
tgggaaatgtatgccattggtggaagtgcaaaccccaccatcaacagccagggaaacaga
tacaatgctccattgaatgccttcgcaaaggaggtaacaaagagggtggacacagctgca
agccagtggaagggctggaactggagatctgaaggagacctcttgctgaacggtgcctac
tttaccccatccggagcaggagcctcagctagctatgctcgtgcttcaagcttgggagcc
aagtcttcctccatggttggatccattacttctggtgctggtgctcttacttgccgcaag
agccgtcagtgctcatag
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