Citrus sinensis (Valencia orange): 102609491
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Entry
102609491 CDS
T02983
Name
(RefSeq) E3 ubiquitin-protein ligase RDUF2-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cit04131
]
102609491
04121 Ubiquitin system [BR:
cit04121
]
102609491
Enzymes [BR:
cit01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102609491
Membrane trafficking [BR:
cit04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
102609491
Ubiquitin system [BR:
cit04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102609491
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-RING_5
zf-RING_UBOX
zf-ANAPC11
zf-C3HC4_3
Rad50_zn_hook
zf-HC5HC2H
FAR1_N
zf-HC5HC2H_2
DUF7573
Motif
Other DBs
NCBI-GeneID:
102609491
NCBI-ProteinID:
XP_006480869
LinkDB
All DBs
Position
6:complement(14585594..14586718)
Genome browser
AA seq
374 aa
AA seq
DB search
MSSIGLSYWCYRCNRIIRIQARTEDAIVCPDCHTGFIEQIETIRRPSNERYPAAEMYLDD
TQNPETFPTTRFGRTRRNGGDRSPFNPVIVLRGPRTPDSGGGNEGTAMERGNFELFYDDA
TGAGLRPLPASMSDFLMGSGFDRVLDQLTQLDFNGVTRFVNPPASKAAIESMPVVTIAES
HVAKESHCAVCKEPFQLNSEAREMPCKHIYHGECILPWLSMRNSCPLCRRELPNEANDRG
SNVGGGPDETLGLTIWRLPGGGFAVGRFNGSRRAAERELPVVFTEMDGGFNAPIGAPRRI
SWVPSRRRAREGNGFARAFRGFTSLLGRIRLPTSRATAEFNRRSPFLDVIYGRSSETATA
NYFSQFHVGGRRLY
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaatcggattgtcgtactggtgctaccgctgcaaccggatcatccggattcag
gccaggaccgaagacgcaatcgtttgccccgattgccataccggcttcatcgaacagatt
gaaaccattcggcgaccttcgaacgagagatatcccgccgccgaaatgtacttagacgac
acccaaaacccggagacattcccgaccacgaggtttggtcggactcggagaaacggcgga
gaccgatcccctttcaaccctgtcatcgtcctccgtgggccccggacccctgattcaggc
ggtggaaatgaaggaactgccatggagagaggaaacttcgagcttttttatgacgacgct
accggggcgggtcttaggccattacccgcgagcatgtcggactttttgatgggttcgggt
tttgaccgggtcctcgaccagttaacacagttagattttaacggggtgacgaggttcgtg
aaccctccggcttcaaaggctgcgatcgagtcaatgccggtggtcacaattgcagaaagc
cacgtggcgaaggaatcgcactgtgccgtttgtaaagagccattccagctcaattcggag
gctcgtgagatgccgtgtaagcacatttatcatggtgaatgtattctcccttggctttcg
atgcgcaactcgtgcccattgtgccggcgcgagttgccgaatgaagcaaatgacagaggc
agcaatgtcggaggtggccccgatgagacgctggggttaacaatttggaggttgcccggt
ggcgggttcgctgtagggaggttcaatggcagcagaagagccgccgagagagagctaccc
gttgtttttaccgaaatggatggtgggttcaatgctccaatcggggctccacggcggatt
tcatgggtgcccagcagaagaagggcaagggagggcaatggatttgctcgtgcttttagg
ggttttacttcacttttgggaaggattaggcttcccacttcgcgggcaactgctgagttt
aatcggagaagtccatttttagatgttatctatggtaggtccagtgagactgccactgcc
aattactttagtcagtttcatgtgggtggtcggaggttgtattag
DBGET
integrated database retrieval system
