KEGG   Citrus sinensis (Valencia orange): 102609501
Entry
102609501         CDS       T02983                                 
Name
(RefSeq) uncharacterized protein LOC102609501 isoform X2
  KO
K14416  elongation factor 1 alpha-like protein
Organism
cit  Citrus sinensis (Valencia orange)
Pathway
cit03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cit00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    102609501
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cit03019]
    102609501
Messenger RNA biogenesis [BR:cit03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     102609501
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 GTP_EFTU_D2 GTP_EFTU_D4 MMR_HSR1 Zn_ribbon_RanBP
Other DBs
NCBI-GeneID: 102609501
NCBI-ProteinID: XP_006483588
UniProt: A0A067FIT9
LinkDB
Position
1:join(339273..339366,339785..339943,340242..340463,340662..340739,341039..341520,341627..341737,341839..342326,342480..342645,342794..343033,343130..343264,343366..343497)
AA seq 768 aa
MPHKVNYEDYDYGDYYEYEDYDDYDYDVEDNGEAPTPASESKQETSKPRVWSCAICTYDN
EEGMSVCDICGVLRTPLVNNNRKTAGGICKDSGASVMAKSLFASLPPRTPKKAVVIQRQN
DGSLMEEGNNCHKLGNTKGKFHEFHEAFSSHSHSKFNIAPFKFDVPSPDDLVSNGLHSSK
TGSKGNFLDLKSSRVSSSVSEKNGSVNTRSSAKKSDIANVLMPKDKQDSVDERNSLKNEV
RASSRISDSSSVVMAKDRLGTIDEGNCSNHGTVDDSISSSVDGTESSSHTGNLTSNMKNM
SSTAKSGNSTNVSARKTNSHTQYKPEKWMLPDKKGDRMTQLNLAIVGHVDSGKSTLSGRL
LFLLGRITQKQMHKYEKEAKLQGKGSFAYAWALDESAEERERGITMTVAVAYFDSKNYHV
VVLDSPGHKDFVPNMISGATQSDAAILVIDASVGSFEVGMNTAKGLTREHAQLIRSFGVD
QLIVAVNKMDAVQYSKDRFDSIKVQLGTFLRSCGFKDASLTWIPLSALENQNLVTAPDDG
RLLSWYKGPCLLDAIDSLRPPPREFSKPLLMPICDVLKSQHGQVSACGKLEAGALRSGLK
VLVLPSGEVGTVHSIERDSQSCSVARAGDNIAVSLQGIDVSRVMSGGVLCHPDFPVAIAT
HLELKVLVLDFAPPILIGSQLECHIHHAKEAARIVKITSLLDTKTGKVTKKSPRCLTAKQ
SAIVEVALQEPVCVEEFSNCRALGRAFLRSSGRTIAVGIVTRIIEDQQ
NT seq 2307 nt   +upstreamnt  +downstreamnt
atgcctcataaagttaattacgaagactatgattacggcgactactacgagtatgaagat
tatgatgactacgactacgatgtagaagataacggggaagcacccacacctgcatctgag
tctaagcaagaaacttccaagcccagggtttggagttgtgctatttgcacttatgataat
gaagagggcatgtctgtatgtgatatatgtggagttcttcgtacacctttggttaataac
aataggaaaacagctggcggcatatgcaaagattctggagcatccgtaatggccaagtct
ctttttgcatcattgccgccacggacgccgaaaaaggctgtagtaattcaacggcagaat
gatggttctttgatggaagagggcaataactgccacaagcttgggaataccaaaggaaaa
tttcatgaattccatgaggcttttagttcccatagccattccaaatttaatatagcccct
ttcaagtttgatgttccatcacctgatgatttggtttctaatggattgcactcctccaaa
acaggttcaaaaggaaattttttggacttaaaatcttctagagtttcctcaagcgtctct
gaaaaaaatggctctgttaatacaagatccagtgctaaaaagtctgatattgcaaatgtg
ttgatgccaaaagacaagcaagatagcgtggatgagagaaatagcttgaagaatgaagta
cgtgcaagttctagaatttctgacagctcttctgtagtaatggcaaaagatagactaggc
actattgatgagggaaattgctcgaaccacggtacagtggatgatagcattagttcttca
gtcgatgggactgaatcaagtagtcatactggtaatttgaccagtaatatgaagaacatg
tcgtcgactgctaaatctggaaattcaaccaatgtaagtgccagaaaaacaaattcacat
actcagtataaacctgaaaagtggatgctcccagacaaaaaaggagatagaatgactcaa
ctaaatcttgcaatagttggccatgttgattcgggaaaatcaactctctcaggtagactg
ttgtttcttcttggacgaataacccaaaaacaaatgcacaaatatgaaaaagaggccaaa
ttgcagggcaaaggatcatttgcttatgcttgggcattagatgagagtgctgaagagagg
gaacggggaataactatgactgtggctgttgcgtattttgattccaaaaattatcatgtt
gttgtgctagactcaccaggtcataaggattttgtcccaaacatgatttctggagcaaca
caatccgatgctgcaattcttgttatagatgcttcagttggttcatttgaagttggtatg
aacactgccaaggggctgacaagggagcatgcacaactgatcagaagttttggtgttgat
caacttattgtggcagttaacaaaatggatgctgtacaatactctaaagatcggtttgat
tcaataaaagtacaacttggaacttttcttcgttcctgtggtttcaaggacgcttctctg
acatggattccattaagtgccctagaaaatcaaaatttggtgaccgctcctgatgatggt
aggctgttatcttggtataaggggccctgtctattggatgcaattgattccttacggcct
cctcctagagaattttcgaagcctctacttatgcccatatgtgacgttcttaaatcacag
cacgggcaggtgtctgcctgtggcaaattggaggctggagctcttcgaagtggattgaag
gttttagtcttgccatctggagaggtaggcactgtgcattccatagaacgagactcccag
tcttgttccgttgccagagctggagacaatatagctgtgagtctgcaaggtattgatgta
agtcgtgttatgtctgggggcgtgctatgtcaccctgatttcccagttgcaatcgccaca
cacttagagttgaaggtgctcgttttggattttgcaccaccaattctaattggctctcag
ttggaatgccatatacaccatgcaaaggaggctgcaagaattgtaaagataacgtcatta
cttgatacaaagactggcaaggttacaaagaagtcacctcgctgtcttactgcaaagcaa
agtgccatagtagaggtcgctctgcaggaacctgtctgtgtggaagagttctcaaattgc
agagctcttggtagggctttccttcgatcatcaggaagaaccattgctgtcggcattgta
acccgcataattgaggatcagcaatag

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