KEGG   Citrus sinensis (Valencia orange): 102609504
Entry
102609504         CDS       T02983                                 
Name
(RefSeq) protein CHROMATIN REMODELING 20 isoform X1
  KO
K10779  transcriptional regulator ATRX
Organism
cit  Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:cit00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cit03000]
    102609504
   03036 Chromosome and associated proteins [BR:cit03036]
    102609504
Transcription factors [BR:cit03000]
 Eukaryotic type
  Zinc finger
   Cys4 GATA-factors
    102609504
Chromosome and associated proteins [BR:cit03036]
 Eukaryotic type
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    102609504
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII AAA_34 CTD2 PLAC9
Other DBs
NCBI-GeneID: 102609504
NCBI-ProteinID: XP_052296169
LinkDB
Position
4:join(21806530..21806667,21806819..21806881,21806952..21807047,21807126..21807218,21808632..21808822,21808899..21809145,21809519..21809632,21810486..21810569,21811071..21811628,21811842..21812134,21812520..21812610,21812693..21812908,21813245..21813364,21814173..21814339,21815176..21815317,21815877..21816026,21816111..21816166,21816249..21816549,21816787..21816901,21817378..21817439,21817608..21817834,21818428..21818631,21818726..21818804,21818879..21819132,21819334..21819709)
AA seq 1478 aa
MEDKHSEDEKHEEVEDIESDSGDSFIVDSESDEPSISGQDDGLHLEEHLTEEEIEELIAE
FLEVESKAAEAQEALELESLVKLKNEVREELAQALHGDDLEAAVEDEMTVYKEQWEAALD
ELETESAHLLEQLDGAGIELPSLYRLIENQVPNGCCTEAWKRRAHWVGSQVTSEMRESIA
GAEDFLQTERPVRRRHGKLLEEGASGFLQKKIANDGSENGGKEVSDINWNSVNKIFSGDV
SEKCAAFGSKHWASVYLASTPQQAAAMGLKFPGVDEVEEIEDVDGNSDDPFVADAIANEK
ELALSEEQRKKFRKVKEEDDANMDRKLQLHLKRRRHQKRSKQKEIGSVDWTIEDSAVETR
PLVDASKSLSNKKTDDGDMPGNNNEVALQNLETGVLESSVKERSLSNGISSVSDSALPDS
SELRGIKRSNESEEPNSEKKRSRTIIIGSDEADVVKDECSTKLEDHSVSPENINDAATDN
SLHSQSLSEKFYCTACNNVAIEVHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWC
GRSSDLVSCKSCKTLFCTTCVKRNISEACLSDEVQASCWQCCCCSPSLLKRLTSELGRAM
GSENLIVSSSESDSENSDADNNLKIGGKRKQKKKIRRILDDAELGEETKRKIAIEKERQE
RLKSLQVQFSSKSKLMNSVTLDGDLSAGASIEVLGDAITGYIVNVVREKGEEAVRIPSSI
SAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSV
DLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWRAKGGV
FLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVK
CQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKI
MNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTND
RVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEK
PRNMNDFLQGKNDDGFFQKDWWNDLLHDHTYKELDYSGKMVLLLDILTMCSNMGDKSLVF
SQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRV
KCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQRKPVFAYRLMAHGT
MEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDPLTAVSKENGQGS
SQNTNCALKHKLPLSHEGCSDKLMESLLGKHHPRWISNYHEHETLLQENEEERLSKEEQD
MAWEVFRKSLEWEEVQRVTVDESISERKPASMSNLTPAPETSSVTQPRGILRSHVVIRKC
TNLSHKLTLRSQGTKPGCSTVCGECAQEISWENCKVAR
NT seq 4437 nt   +upstreamnt  +downstreamnt
atggaggacaaacactcggaagatgaaaaacatgaggaagtggaagatattgagagtgat
tctggtgactcttttattgtagattcagaaagtgatgagccgtcaatatctggacaggat
gatggattgcatcttgaggaacatttgaccgaggaggaaatagaagagctaattgcagag
ttcttggaagttgagagcaaggctgcagaggctcaggaggctcttgaacttgagtccctt
gtcaaactgaagaatgaggtgagagaagagttggcacaagcactgcatggagatgatttg
gaggctgctgttgaagatgaaatgactgtttataaagaacagtgggaagctgcactggat
gaacttgagactgagagtgcgcacttgttggaacaactcgatggagctggtattgaatta
ccaagcctttataggttgattgagaaccaggttcctaatggttgttgcactgaagcttgg
aaaagaagagcacactgggtaggatctcaggtgacaagtgaaatgagggagtcaatagct
ggtgccgaggattttcttcaaaccgaaaggcctgtaagaaggcgacatggaaaacttttg
gaggagggtgctagtggattcctccagaaaaaaattgctaatgatgggagcgagaatggt
ggaaaagaagtttcagacatcaactggaactcagttaacaaaatattttctggtgatgtt
tctgagaaatgtgctgcatttggcagcaagcattgggcttctgtttacttagctagtact
ccacagcaagctgcagcaatgggactgaaatttcccggtgttgatgaggttgaagagatt
gaagatgttgatggaaattctgatgatccgtttgttgcagatgcaatagcaaatgaaaaa
gagctggctctttctgaagagcaaaggaaaaaatttagaaaggtgaaagaggaagatgat
gcaaatatggatcgcaagcttcagcttcatttgaaacgaaggaggcatcaaaaaagatct
aaacagaaagaaattggctcagttgattggacaattgaagattctgctgttgagacacgg
cctcttgttgatgcctctaaatctctttcaaacaagaaaactgatgatggtgatatgcct
ggcaataacaatgaggttgcattgcaaaatttggaaactggtgtgcttgaaagttccgtc
aaggaaaggtcactgagtaatggcatttcttcagtctcagattctgctttgcctgattcc
agtgaacttagaggtataaagcgttccaatgaaagtgaggagccaaacagtgagaaaaag
aggagtcggactattattataggtagtgatgaagcggatgtggtgaaggatgaatgttcc
accaaattggaagatcattctgtctcacctgaaaatatcaatgatgctgccaccgataat
tcccttcattctcagagtttgagtgagaagttttactgcactgcctgtaataatgtggct
attgaagtgcacccccatccaattcttaatgtaattgtttgcaaggattgcaaatgccta
ctggagaagaagatgcatgtgaaggatgccgactgctctgagtgttactgtgtatggtgt
gggcgaagcagtgatttagtgagttgtaaatcgtgtaaaacgttattctgtaccacttgt
gtgaagaggaatatcagtgaagcatgcttgtctgatgaagttcaggcctcttgctggcaa
tgttgttgctgctctccaagtcttttgaaaagattgacatcagaattggggagagccatg
ggatctgaaaacctgatagtttctagctctgaaagtgattcagagaattcagatgctgac
aacaatctcaaaattggcggcaagagaaagcagaaaaagaaaattcgaaggattctggat
gatgctgaattaggagaagagaccaaaaggaaaattgcaatagagaaagaacgacaagaa
cgtctgaagtcattgcaagtacagttttctagcaaatctaagctgatgaactctgtgaca
ttggatggagacttgtcagctggtgctagcattgaagtgcttggtgatgccattaccggt
tatatagtgaatgttgtcagggagaaaggtgaagaagcagtgaggatcccatcaagcata
tcggctaaattgaaagctcaccaggtggtagggataagatttatgtgggaaaatatcata
cagtcaatcagaaaagtgaaatctggagataaagggcttggttgcattctagctcataca
atgggtcttggtaaaacttttcaggtcatagcttttttgtatacagcaatgagaagcgtc
gatttgggattaagaactgctcttattgtcacacctgtaaatgtgcttcataattggaag
caggagtttatgaaatggaggccatcggaattgaagcctctccgtgtcttcatgctagaa
gatgtatcaagggatagacgagcagaattgcttgcaaagtggagagctaagggtggtgtt
tttctgattggttatactgctttccggaacttgtcttttggaaagcatgtgaaggatcga
aacatggctagagaaatttgtcatgccttgcaggatggacctgatatacttgtttgtgat
gaagcacacatgattaaaaacactagggctgatacaacccaagccttgaaacaagtgaaa
tgccaaagaaggattgcattgactggatcacctcttcaaaacaatctcatggaatattat
tgtatggttgatttcgtacgggaaggttttcttggtagcagccatgagtttaggaaccgc
ttccaaaatcctattgaaaatggtcaacatactaattcaacatctgaggatgttaaaatt
atgaatcaaaggtctcacatcctctatgaacaattaaaaggatttgtccagagaatggac
atgaatgtggtgaagaaggacttgccgccaaaaactgtctttgtaataactgtgaagctc
tctcctctacagaggagattatacaagagattccttgatttgcatgggttcacaaatgac
agagtttccaatgaaaagatacgaaagagttttttcgctgggtaccaggctttggctcag
atatggaaccatcctgggatcttgcagttgacaaaagataaagggtatccaagtcgtgag
gatgctgaggacagctccagtgatgaaaacatggattataatgtggtgataggagagaag
ccgcgaaacatgaatgattttctgcagggaaagaacgacgatggctttttccaaaaggat
tggtggaatgatcttctccatgatcatacctataaagagctcgactacagtggcaaaatg
gtcttgctgctggacattctaaccatgtgttctaatatgggcgataagtcattggttttt
agccaaagcataccaactttagacctcatagagttttatctttcaaaattacctcggcct
gggaaacaagggaagttgtggaaaaaaggaaaggactggtacagactagatggaagaaca
gagagctctgaaaggcaaaagttggtggagaggtttaatgagcccctaaataaaagggtg
aaatgtactctgatttcaaccagagctggatctctggggataaatcttcattctgctaac
cgtgtaattattgttgatggttcttggaatccaacatatgatcttcaggccatatatcgt
gcttggaggtatggacaaagaaagccagtttttgcttaccggttgatggctcatggaacc
atggaagagaagatatataagcgtcaggtgacaaaggaagggcttgctgcaagggtggtg
gatagacaacaagtccataggactatatcaaaagaagaaatgttacatctctttgaattt
ggtgatgatgaaaatcctgatcctttgacagcagtcagtaaagagaatggacaaggaagt
agtcaaaatacaaattgtgcactgaagcataagttgcctctttcgcatgaaggttgttct
gacaaattgatggaaagcttacttggcaagcatcacccaaggtggatttccaattatcat
gaacatgagacccttttgcaagagaatgaagaagaaaggctttcgaaggaggagcaagac
atggcttgggaagtattccggaaatcattagaatgggaggaagtacagcgagttacagtg
gatgaatccatatcagagcgtaagcctgcttccatgtcaaacttgactcctgctccagag
accagcagtgtcacacaacccaggggcatattgaggagtcatgtggtaattcggaaatgc
actaatctatctcataagctgactcttagaagtcagggcacaaaacctggttgtagtact
gtatgtggagaatgtgcccaggagatttcctgggagaactgcaaagtcgctagatga

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