Citrus sinensis (Valencia orange): 102609535
Help
Entry
102609535 CDS
T02983
Name
(RefSeq) RNA polymerase sigma factor SigE, chloroplastic/mitochondrial
KO
K03093
RNA polymerase sigma-I factor
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cit03021
]
102609535
Transcription machinery [BR:
cit03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
102609535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
Motif
Other DBs
NCBI-GeneID:
102609535
NCBI-ProteinID:
XP_006490565
UniProt:
A0A067EY28
LinkDB
All DBs
Position
9:complement(join(1295051..1295248,1295420..1295683,1295832..1296068,1296367..1296513,1296984..1297679))
Genome browser
AA seq
513 aa
AA seq
DB search
MGVVTISSSPARSPIGLSTISHRSTSKRPLIVAFKADKSNNQALFSPQEQIPLPIETPKR
HQKRRENSRKRLERVKGVFSDEASPCTLDVDYNEAAAKLENIYKLSPAVTTSEVKYADGV
VKRGRQRRKRIGEVEKKSDDVSGKPVVRNQVKRPKRLSLDKRIELRKNEDEKVVTKTRKT
DSKDEHEKIEKLVREYSYSTDLVSLDWKKMKIPPVLSSTEHTWLFKLMQPMKVFVQVKEQ
LQKDLGREPTDVELAEATNMSAAPVKKCLEVGRAARNKLIKHNLRLVLFVIKKYFQDFAN
GPRFQDLCQAGVKGLITAIDRFEPKRRFRLSTYGLFWIRHAIIRSMTVSSFTRVPFGLES
VRGEIQRAKLELLFELKRVPTDEEIIQGVNISPERYREVMKASKPILSLHSRHGVTQEEF
INGITDVDGVENENQRQPALLRLALDDVLDSLKPKESLVIRQRFGLDGKGDRTLGEIAGN
LNISREMVRKHEVKGLMKLKHPTRVDYLRQHMV
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtcaccatctctagttcacctgctagatctccaattggattaagcacgatt
tctcaccgatctacgtcaaaaaggcctttgattgtggcattcaaagcagataaatccaat
aaccaagctttgttctcaccccaggagcagatcccactgccgatagagacacccaaacga
caccagaagagacgagaaaacagtagaaaacgtctggaaagagtgaaaggtgtcttctct
gatgaggcttctccatgtaccctggatgtggattacaatgaagcggctgccaaacttgaa
aatatatacaagcttagccctgcagttacgacctcagaagtgaaatatgctgatggtgtt
gtgaaaagaggccggcagaggagaaagaggattggtgaagttgagaaaaaatcagatgat
gttagcggtaaaccagtggttaggaaccaggttaagaggcctaagcgattgagtcttgat
aagagaattgagctgagaaagaatgaggatgagaaagtggtcaccaagactaggaaaacg
gacagtaaagatgagcatgagaaaattgagaaacttgtaagggagtattcgtattcaacg
gatttggtcagcctggattggaagaaaatgaagatacctccagttttgtcgtctacagag
catacctggttgttcaagttgatgcaacctatgaaggtatttgtgcaagtaaaggaacaa
ttgcagaaagatttggggagagaaccaactgatgttgaattagcagaggcaacaaatatg
agtgcggctccagtgaaaaaatgcttggaagttggccgagctgcacggaacaagctcata
aagcacaatctccggcttgttttatttgtcatcaaaaaatattttcaagactttgcaaat
ggccccagatttcaagacctttgtcaggctggagtaaaaggacttatcactgcaattgat
cgttttgaaccaaaaaggagattccggctatcaacatatggacttttttggattaggcat
gctattatacgttcaatgacagtatcaagctttactcgtgttccatttggccttgaatca
gttagaggggaaatccagagagctaaacttgagttgttgtttgagcttaagagggtacca
acagatgaagagataattcaaggggtaaatatctcccctgagaggtaccgtgaagtgatg
aaggcatcgaaacccatcctttctctccattcaaggcatggggttacacaagaagagttc
atcaatgggattactgatgtcgatggtgttgaaaatgaaaaccagagacaacccgctctt
ctaaggcttgcgcttgatgatgtgcttgattctctgaagcctaaggagagcttggtgatc
agacaaagatttggactggacggtaaaggtgataggacactgggagaaattgctgggaac
ttaaatatttcaagggaaatggtccgtaaacatgaagttaagggtctgatgaaactcaag
catccaactcgagttgattatcttcgccagcacatggtatga
DBGET
integrated database retrieval system
