KEGG   Citrus sinensis (Valencia orange): 102609571
Entry
102609571         CDS       T02983                                 
Name
(RefSeq) protein EXPORTIN 1A isoform X1
  KO
K14290  exportin-1
Organism
cit  Citrus sinensis (Valencia orange)
Pathway
cit03008  Ribosome biogenesis in eukaryotes
cit03013  Nucleocytoplasmic transport
cit03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:cit00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    102609571
   03008 Ribosome biogenesis in eukaryotes
    102609571
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    102609571
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cit03019]
    102609571
   03009 Ribosome biogenesis [BR:cit03009]
    102609571
   03016 Transfer RNA biogenesis [BR:cit03016]
    102609571
   03036 Chromosome and associated proteins [BR:cit03036]
    102609571
Messenger RNA biogenesis [BR:cit03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     102609571
Ribosome biogenesis [BR:cit03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    102609571
  Pre-60S particles
    102609571
Transfer RNA biogenesis [BR:cit03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    102609571
Chromosome and associated proteins [BR:cit03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     102609571
SSDB
Motif
Pfam: CRM1_C Xpo1 CRM1_repeat_2 CRM1_repeat_3 CRM1_repeat IBN_N DUF3385 Gpr1_Fun34_YaaH
Other DBs
NCBI-GeneID: 102609571
NCBI-ProteinID: XP_052292466
LinkDB
Position
3:complement(join(38928296..38928418,38928585..38928689,38928775..38928912,38928990..38929127,38929225..38929332,38929498..38929608,38929933..38929999,38930430..38930612,38930693..38930773,38930899..38930984,38932755..38932844,38932959..38933039,38933129..38933227,38933381..38933446,38934073..38934181,38934432..38934529,38935506..38935616,38936571..38936630,38937039..38937242,38938143..38938241,38938366..38938473,38939269..38939313,38939400..38939462,38939658..38939735,38939949..38940017,38940132..38940270,38940811..38940893,38940974..38941081,38941290..38941361,38941459..38941551,38942889..38943005,38944222..38944320))
AA seq 1076 aa
MAAEKLRDLSQPMDVALLDATVAAFYGTGSKEERTAADQILRDLQNNPDMWLQVVHILQN
SKNLNTKFFALQVLEGVIKYRWNALPVEQRDGMKNYISEVIVQLSSNEASFREERLYVNK
LNIILVQILKHEWPARWRSFIPDLVAAAKTSETICENCMAILKLLSEEVFDFSRGEMTQQ
KIKELKQSLNSEFQLIHELCLYVLSASQRTDLIRATLSTLHAFLSWIPLGYIFESPLLET
LLKFFPMPSYRNLTLQCLTEVGALNFGDFYNVQYVNMYNVFMVQLQTILPPTTNIPEAYA
HGNSEEQAFIQNLALFFTSFFKFHIRVLESTQENISALLMGLEYLINISYVDETEVFKVC
LDYWNSFVLELFDAHNNLENPAVTANMMGLPMPLLPSVVDGIGAQLLQRRQLYAVPLSKL
RMLMICRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYKIMRETLIYLSHLDHEDTEKQM
LKKLSKQLSGEDWTWNNLNTLCWAIGSISGSMMEEQENRFLVMVIRDLLNLCEMTKGKDN
KAVIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIVQKCK
RKFVIVQVGENEPFVSELLSGLATTVADLEPHQIHTFYESVGHMIQAESDVQKREEYLQR
LMLLPNQKWSEIIAQARQSVDFLKDQDVIRTVLNILQTNTSVASALGTFFLSQISVIFLD
MLNVYKMYSELISSSISSGGPFASKTSYVKLLRSVKRETLKLIETFLDKAEDQPQIGKQF
VPPMMDPVLGDYARNVPDARESEVLSLFATIINKYKGAMIDDVPRIFEAIFQCTLEMITK
NFEDYPEHRLKFFSLLRAIATHCFPALIRLSSQQLKLVMDSIIWAFRHTERNIAETGLNL
LLEMLKNFQASEFCNQFYRTYFVTIEQEIFAVLTDTFHKPGFKLHVLVLQHLFCLVESGL
LTEPLWDAATIPYPYPNNAMFVREYTIKLLGTSFPNMTGAEVTQFVDGLLESRNDLSTFK
NHIRDFLVQSKEFSAQDNKDLYAEEAAAQRERERQRMLSIPGLIAPNEIQDEMVDS
NT seq 3231 nt   +upstreamnt  +downstreamnt
atggcggctgagaagctccgagatttaagccagccgatggacgtcgcgttgcttgacgcc
actgttgctgccttctatggcactggatctaaggaagagagaacagctgcagatcagatc
ttgcgggacttgcaaaataatcctgatatgtggctccaagttgtgcacatcctgcaaaat
tcaaaaaacctcaataccaagtttttcgccttgcaggttctcgaaggagttattaaatat
aggtggaacgcattacccgttgaacagcgggatggaatgaaaaattacatttctgaagtc
attgtacagctatcaagtaatgaggcctcttttcgagaagaaaggctgtacgtcaacaag
ctgaatatcatattggttcagattttgaagcatgagtggcctgcacggtggcgaagcttt
attcctgatcttgttgcagcagcaaaaactagtgaaaccatttgtgagaattgcatggct
attctcaagcttttaagcgaagaagtttttgatttttcaagaggggaaatgactcagcag
aagatcaaagagcttaagcaatcattaaacagtgagtttcagctcattcatgagttatgc
ttatatgtactatccgcatctcaaagaactgatctcataagggcgacactgtccacactg
catgcattcctgtcatggatacccttgggctatatttttgagtccccattactggaaaca
ctgctgaaattctttcccatgccttcttatagaaatcttactctgcaatgtttgacggag
gttggagcccttaattttggggacttctataatgtgcagtatgttaacatgtataatgta
ttcatggttcagttacagactattcttcctccaactacaaacatccctgaggcttatgct
catggcaatagtgaggaacaggcatttattcaaaatttggcactctttttcacttcattt
ttcaagtttcatatcagagtgctcgaatccactcaagaaaatataagtgcattgctgatg
ggtcttgaatatctcattaatatatcatatgtggatgaaacagaggtttttaaggtttgc
ttggattattggaactcttttgttttggagctttttgatgcgcacaataatctggaaaat
cctgctgtgacagcaaacatgatgggactaccgatgcctttgcttccaagtgttgtcgat
ggtattggggcacagcttctgcaacggcggcagctttatgctgttccattgtccaagctg
agaatgctaatgatctgtcgtatggctaagcctgaagaggtcctgatagttgaagatgaa
aatgggaatattgtccgcgaaaccatgaaggacaacgatgttcttgttcaatataagatt
atgagggagacattaatctacttgtcacaccttgaccatgaagacactgaaaagcagatg
ctaaaaaagttaagtaaacaattgagtggtgaagattggacgtggaacaatttaaacaca
ttatgttgggcaataggatccatatccgggtcaatgatggaagaacaggagaacagattt
ctggtgatggttattcgtgacttgctgaatctatgtgaaatgacaaaaggaaaagataac
aaagctgttattgcaagtaatattatgtatgttgttgggcagtatccaagattcttaaga
gcccattggaagttcttgaaaactgttgtgaataagttgtttgagttcatgcacgaaaca
catccgggagttcaggatatggcttgcgacacattcctgaaaattgttcagaagtgcaag
cggaagtttgttattgtacaggtaggagaaaatgaaccatttgtatctgaacttctctca
ggccttgcaacaacagttgcagatcttgaacctcatcagatccatacattctatgagtct
gttggtcatatgattcaagcagagtctgatgtacaaaagcgggaggaatacctgcagagg
ttgatgcttcttccaaaccagaaatggagtgaaattatagcacaggcacgacaaagtgtt
gattttcttaaagatcaagatgtgatcaggactgtgcttaatatattgcagacaaataca
agtgttgccagtgctcttggaacattttttttgtcccaaatttctgtgatcttcttggac
atgctaaatgtgtacaaaatgtacagtgagcttatatcaagtagcatttcatcaggaggg
ccttttgcatctaaaacatcttatgtgaaacttctacggtctgttaaaagggaaactctg
aagctcattgagacattcctggacaaggctgaagatcagccgcagataggaaaacagttt
gtccccccaatgatggatcctgtccttggtgactatgctaggaatgtgcctgatgctaga
gagtcagaagttctttcactttttgccacaatcataaacaagtataagggtgcaatgata
gatgatgtgcctcgcatatttgaagccattttccaatgcacactggagatgataaccaaa
aattttgaagattacccagagcatcgtctcaaattcttttctttgcttcgtgccattgct
actcattgttttcctgctctgattcggttgtcaagtcagcaattaaaactagtcatggat
tcaatcatatgggcctttcggcatacagaaaggaatattgcggaaactgggctaaatctt
ttattggagatgttgaaaaactttcaggcgtctgagttctgtaaccaattctaccggaca
tactttgtgacaattgagcaagaaatatttgccgtattgactgacacatttcataaacct
gggttcaagttgcacgtcctagttctgcagcacctgttttgcctggttgagagtggttta
ttaacagagcctttgtgggatgctgccacaattccttatccatatccaaataatgcaatg
tttgttcgtgaatacaccataaaacttctgggtacttctttccccaacatgactggagca
gaggttactcaatttgttgatggattattggaatcaagaaatgacctctctacgttcaag
aatcacatacgtgattttcttgttcaatcaaaagaattttcagctcaggacaacaaagat
ctatatgcagaagaagctgccgctcagcgggaaagagagcggcaaagaatgctttctatt
ccagggcttattgccccaaatgagatacaagatgaaatggtggactcatag

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