Citrus sinensis (Valencia orange): 102609623
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Entry
102609623 CDS
T02983
Name
(RefSeq) nuclear pore complex protein NUP133
KO
K14300
nuclear pore complex protein Nup133
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102609623
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cit03019
]
102609623
03036 Chromosome and associated proteins [BR:
cit03036
]
102609623
Messenger RNA biogenesis [BR:
cit03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102609623
Chromosome and associated proteins [BR:
cit03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
102609623
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_N
Nucleoporin_C
Motif
Other DBs
NCBI-GeneID:
102609623
NCBI-ProteinID:
XP_052287834
LinkDB
All DBs
Position
2:complement(join(20666101..20666649,20666913..20666983,20667620..20667956,20668431..20668583,20668669..20669360,20669617..20671440,20671533..20671657,20672190..20672377))
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AA seq
1312 aa
AA seq
DB search
MFSPGTKRANLSRRKERNQVDSHSPVTPLAENRKSQHDITSIANRPSTGTPAPWAPRLSV
LARIPPAGKSEKGDVVDPIKPVFIGEFPQVVRDEQTSILRKHIPGDACISGGIDREMCLS
WIICGSRLFIWNYLSSAALNNCVALEIPSNVLDQGHTGRNSYHGSHWLLSVVNWDSTSVP
TNKVARHWNSAGIVLCNQKTGALVFWPNIRESVNNPVISLVSSDESEVTSSPVDGKTTPN
GQWHGNRVRSSLIVSGTFNSMIASAVPGTQQSCVALTSSSSGELWLFYCSPAGIHRSKVY
HELAGASSQSSDGGQLAGSKGYPRSLTWGYSLSSSKEPNWQFLLLTDHEIQCFNIKLFPD
LNVSKLWSHEIVGTDGDLGIKKDLAGQKRIWPLDVQVDNHGKVITILVATFCKDRVSSSS
YTQYSLLAMQYKSGVNIYSDIHERVLEKKAPIQVIIPKARVEEEDFLFSMRLRVGGKPPG
SAIILSGDGTATVSHYYRNSTRLYQFDLPYDAGKVLDASVLPSSDDGEDGAWVVLTEKAG
IWAIPEKAVVIGGVEPPERSLSRKGSSNEGSVPEERRNFMLAGPRRVSSDAWDARDRQKA
VSTGVARRSAQDEESEALLGHLFHDFLLSGQVDGSFEKLQNSGAFERDGETSVFVRTSKA
IVATLAKHWTTTRGAEILSMVSSQLKDKQQKHEKFLQFLALSKCHEELCARQRHSLQIIL
EHGEKLAGMIQLRELQSMISQNRTEIQISGALWDLIQVVGERARRNTVLLMDRDNAEVFY
SKVSDLEEVFYCLDKQLQYVISVEQPHGVQIQRTCELSNVCVTIVRTAMHYRNEHRMWYP
PPEGLTPWSSQYVVRNGLWSIAAFILQLLNESPGLDMSAKSDVCAHLEALCEVLLEAYSG
AITATVERGEEHKGLLNEYWNRRDSLLDSLYQQVRGSLGFRYQDLDEIVEDKDVEMLRKL
SSSLLSIAKRHEGYKTMWKICCDLNDSEMLRNLMHESMGPKGGFCQFVFKELYEKRQFSK
ILRLGEEFQEELSVFLKYHRHLLWLHEMFLHQFSSASETLHVLALSENESSISSAEDGEA
ADHVIHEPTLADRKRLLNLAKIAVIAAGKDADSGAKVNRIEADLKILKLQEEIMKVVAAD
EVKQYVGGPLLRPEELVELCLKSENPELSLLAFDVFAWTSSSFRKSHRHLLEDCWKNAAN
QDDWGQLYQASIDEGWSDEETLQQLRDTLLFQASNRCYGPNAETIDEGFEEVLPLREGDS
EDQILNDSSSSVEAILKQHKDFPFAGKLMLTAVMLGSVQDDVKVDDSPSPME
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgttctctccaggaacaaagagagcaaatttgagccggcgaaaagagcgaaatcaagtg
gattcacattcaccggtaactccactcgccgagaatcgtaaatctcaacacgacatcact
tcgatcgccaaccggcccagcaccggcactcctgctccttgggctccacgcttatctgtt
ctcgccagaattccacctgcaggcaaaagtgagaaaggcgatgtggtagatcctattaag
cctgtatttattggagagtttccccaagtcgttcgtgatgaacagaccagcattcttcgc
aagcacattcctggtgatgcttgtatatctggtggaatagatagggaaatgtgtctttcc
tggattatctgtggaagcagactctttatttggaattacttgtcgtctgcagcgttaaac
aattgcgttgctctggagatcccttcgaatgttttggatcagggacatactggtagaaat
tcttatcatggtagtcattggttgcttagtgttgttaattgggatagcacctcagtgcca
acaaataaagttgcacgacattggaactctgctggaattgtattgtgtaaccaaaaaacc
ggagctcttgtattctggcctaatattcgtgaaagtgtaaataatccggttatcagtctt
gtatcatctgatgaatcagaggttacttcttcgcctgttgatgggaagactacccctaat
ggtcagtggcatgggaacagggtcaggagtagtttgattgtatcaggtacttttaactcc
atgattgcttctgcggttcctggtactcaacagtcttgtgttgccctaacaagtagttca
agtggtgagctttggctgttttactgcagccctgctggtatccaccgtagcaaagtatat
catgagttggctggtgcatcatctcagagcagtgatggtgggcaacttgcagggagcaag
ggttatccaaggtcactaacctggggttactctctgtcttcttctaaggaacccaactgg
cagttcttgttgctgactgatcatgagatacagtgcttcaatattaaacttttccctgac
ttgaatgtgtcaaagctctggtctcatgaaatcgttggcaccgatggtgatttgggtata
aaaaaggatttggctggtcagaagagaatctggcctctggatgtgcaagtagacaatcac
ggtaaagtgattacgattcttgttgccactttctgtaaggatcgtgtcagcagttcaagt
tacacacagtattctctgctggccatgcaatataaatctggggtaaacatctactctgat
attcatgaaagagtcttagagaaaaaagctcctatccaagtgataattccaaaggcaaga
gtagaagaggaggacttcttattctcaatgaggcttagggtcgggggaaagcctccagga
tcagcaatcatactttctggtgacggaacagcaacagtctcgcattattataggaactct
actcgactatatcagtttgacctgccttatgatgccggaaaagttcttgatgcttcagtt
cttccttcatcagatgatggtgaagatggtgcatgggttgtgctaaccgagaaagcggga
atatgggcaataccagaaaaggctgttgtaattggtggagttgaaccacctgagcgaagc
ttgtcacggaaaggaagctccaatgaaggatcagtacctgaagagagaagaaactttatg
ttggcaggtcctagaagagttagctctgatgcttgggatgctagagatagacaaaaggct
gtttcaactggggttgcacgtcgatcagcccaagatgaagaatcagaggccttacttggt
catctttttcatgattttctgttatctgggcaggttgatggttcatttgaaaagcttcaa
aactctggggcatttgaaagagatggagaaacaagtgtttttgtccggactagcaaagcc
attgtggccaccttggctaaacactggacaacaactagaggtgctgagattttgtcaatg
gtatccagtcagctcaaggataagcagcagaagcatgaaaagtttctgcagtttctagct
ttgtccaagtgtcatgaggagttatgtgctagacagagacattctttgcaaatcatcttg
gagcatggtgaaaagcttgctggaatgattcaactcagggaactgcaaagtatgattagc
cagaaccgtacagagattcaaatttcaggtgccctgtgggatcttattcaagtagttggt
gaaagagctcgccgtaatactgtgcttctgatggacagagacaatgctgaagtcttctac
agtaaggtttctgatcttgaagaggtattttattgcttagacaaacaactgcagtatgta
attagtgtagaacagccacatggggttcagatccagagaacatgtgaactctcaaatgta
tgtgttactatagttcgcacggccatgcactatagaaatgagcatcgcatgtggtatcca
ccacctgaaggtttaacaccttggtcttctcaatatgttgtacgtaatgggctgtggagc
attgctgctttcattctccagctgctaaacgaaagtcctggacttgatatgtctgcaaaa
tcagatgtgtgtgctcatctagaagcactctgtgaagttttactggaagcatatagtggg
gctatcacagcaacagttgagcgtggagaagagcacaaaggtctgttgaatgagtattgg
aatagacgggattcacttcttgactccctttatcaacaagtcagaggctctttgggattt
cgttaccaggatttggatgaaattgttgaagataaagatgtagaaatgctcagaaagctt
tcttcaagtttgctgtctattgcaaaacggcatgaaggctacaaaactatgtggaaaata
tgttgtgaccttaatgattcagaaatgctgagaaatcttatgcatgagagcatggggcct
aagggaggcttctgtcagtttgtatttaaagaactatatgagaagaggcaattttccaag
attttaaggcttggtgaggagttccaagaagagctatctgtttttctgaagtatcaccgt
catcttctttggcttcatgaaatgtttcttcatcagttttcctcagcatcagaaactctt
catgttttagctctctctgaaaatgagagctctatttcatcagctgaagatggggaagcc
gctgaccatgtgattcatgaaccaacattggcggacagaaagcgcctgttgaaccttgca
aagatagctgtcatcgctgcgggtaaggatgctgattctggagcaaaagtaaaccgcatc
gaagctgatttgaaaattttaaaattgcaggaagaaatcatgaaagttgtggctgctgat
gaagtgaagcaatatgttggaggaccactccttcgcccagaggaattagtcgagctctgc
cttaaaagtgaaaaccctgagctttcgctgctggcttttgatgtgtttgcatggacaagc
tcatcatttcgaaagagccatagacaccttctggaggattgctggaagaatgctgcaaat
caggatgactggggccaactttaccaagcatcaatagacgaaggatggagtgatgaggaa
acattgcaacaactgagagacacattgctgttccaagcatcaaataggtgttatggaccc
aatgcagaaactattgacgaaggatttgaagaagtgttgccactgcgagaaggagactca
gaggatcagattttgaatgattcaagttcttctgtagaagcgatattgaagcagcataag
gattttccatttgctggcaagctaatgctgaccgctgtcatgctaggcagtgtacaggat
gatgtcaaagttgatgacagtccttccccaatggaataa
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integrated database retrieval system
