Citrus sinensis (Valencia orange): 102609677
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Entry
102609677 CDS
T02983
Name
(RefSeq) RNA-binding motif protein 25 isoform X1
KO
K12822
RNA-binding protein 25
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102609677
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cit03041
]
102609677
Spliceosome [BR:
cit03041
]
Complex A
U1 snRNP components
U1 related factors
102609677
Complex B
102609677
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
RRM_1
Motif
Other DBs
NCBI-GeneID:
102609677
NCBI-ProteinID:
XP_006483834
LinkDB
All DBs
Position
4:join(26799351..26799810,26801248..26801507,26801628..26801780,26802386..26802797,26802994..26803662,26803800..26804401,26804939..26805190)
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AA seq
935 aa
AA seq
DB search
MADSPASPATIDPNFKQPESNNPNRKPDTPSTSTSQPEQQQQQQPLIINPNPSPNPNQTP
APASLPPAPVQSFAPPTQPISYRPVPMSTASQFSPVQNYQSPVVQPPGVGGVAVTMAPPM
MQYPGVPGQPPNPALRPYAPIPNGYGAVPAPASGLPRYPAPYPSMVRPAFPPRPPGPVGV
LPSVARPPVPGIPGVRPIMPPVVRPVPLPTVTPAEKPQTKVYVGKIAPTADSDFVLSVLK
VCGTVKSWKRAQYPSNGTPKGFGFCEFESAEGVLRALRLLNKFNIDGQELMLKVDQATRE
YLERYVDKKTENTKKLKETQDAGAGKEDESVQSVEKNEPTKSPENLKDNETGNKESHDPT
NFGVVTEEDRKADQEALEKLTCMVEERLKTNPLPPPPPQTTADGSGISNSELPAKARDGD
SDVDMIRNDIAEDKLDDETTSDTKASDHDRPETSSPDRSRVHDRRGRDKERDLKREKERE
IDRYEREAERERVRKEREQRRKIEEAEREYERCLKDWEYREREREKERQYEKEKEKERER
KRKKEILYDEEEDEDDSRKRWRRSVLEEKRRKRIREKEEDLADEVREEEEIAVAKRRAEE
EQLQQQQRDALKLLSDNAVNGSLAEESAVESKGMDVEHDYHDDSIRENHMAGDPSSQNGN
GDESTNVPIAASDMRQSGNVPARKLGFGLVGSGKRTAVPSVFHVEDDDDADKDKKMRPLV
PIDYSTEELQAAQPHVSGANPPNLAAAAEFAKRISNVNSKEEKSDAERERSRRLHDRSSQ
REKDRSDEDNNRTRDEHKEKILDRDRDREHGLDKVKTPDNKKLLDAKQLIDMIPKTKEEL
FSYEINWAVYDKHELHERMRPWISKKITEFLGEEETTLVDYIVSSTQDHVKASQMLELLQ
TILDDEAEMFVLKMWRMLIFEIKKVETGLALRSKS
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atggctgactctccagcatctccggccaccatagacccgaatttcaagcagcccgaatcc
aataatcctaatcgcaaacccgatacgccgtcgacctccacatcacaacctgaacagcaa
caacaacaacaacccttaattataaatcctaaccctagccctaacccgaatcagacgcca
gcacctgcatctctgccgccggcaccggttcagtcattcgcgccgccgacacagcctatc
tcatatcgtccagttccgatgtcaacggcgtctcagttctctccggttcagaattaccaa
agccccgttgtgcagccgcccggggtgggcggtgttgcagtgacgatggcgccgcctatg
atgcaatatcccggtgttccaggtcagcctccgaatccggctcttagaccttacgcccca
atacccaacggatatggagctgttcccgcgcctgcttctggacttcctcgatatcctgct
ccatacccatctatggttcgacctgcatttcctccacgtccaccaggacctgttggtgtg
cttccatcggtggcgcgtccccctgttcctgggatccctggtgttcgcccaataatgcca
cctgttgttaggccagttcctttacctactgttacaccagcagaaaaaccacaaactaaa
gtttatgttggaaaaatagcaccaactgcagatagtgattttgtgctttctgttcttaag
gtttgtggaactgtcaagagttggaaacgagctcaatacccctctaatgggactcccaaa
ggctttgggttctgtgaatttgagtctgctgaaggagttcttcgtgcgttgcgtctactt
aataaatttaacattgacgggcaagaactgatgttgaaggttgaccaagcaacaagagaa
tatctggagcgctatgttgacaagaaaactgagaacacaaagaaactcaaggaaactcaa
gatgcaggggctgggaaagaggatgaaagcgtgcaaagtgttgagaagaatgagcctacc
aaatcccctgagaatctaaaggacaatgaaactggaaacaaagaaagtcatgacccaacc
aactttggggttgtgactgaggaggatagaaaagccgaccaagaggctttggagaagctt
acatgcatggtcgaggaaaggttaaagaccaatcctcttcctccaccccctcctcaaaca
actgctgacggttctgggatttcaaactcagaactgccagctaaagcaagggatggagac
tctgatgtggatatgattagaaatgatatagctgaagataaacttgatgatgaaacaact
agtgacaccaaagcgagtgatcatgatcggcctgagacaagctcacctgatagaagtagg
gtgcatgatagaagaggcagagacaaagagcgggatttgaaacgtgaaaaggaacgggaa
attgatagatatgagagagaagcagaacgagaacgagttaggaaagagagagagcaaaga
aggaagattgaggaggccgagcgggagtatgaaaggtgtctcaaagattgggagtacaga
gaaagagagagagagaaagaacggcaatatgagaaggagaaggaaaaagagagggaacgc
aaacgaaagaaagagatcctttatgacgaagaagaagatgaagatgattcccgaaaaaga
tggcgtagaagtgtgttagaggaaaagaggaggaagaggatacgggaaaaggaggaggac
ttggctgacgaagtaagggaagaggaagaaattgctgtggccaagaggagggctgaggag
gaacagctgcagcagcaacaaagagatgcattaaagcttttgtctgataatgcagtaaat
ggaagcttagctgaagaatctgctgttgaaagcaaaggtatggatgttgagcatgattat
catgatgattccatccgcgaaaatcacatggcaggagatccgtcttcacaaaatggtaat
ggggatgaatcaaccaatgtgccgatagctgcatcagatatgaggcagagtggcaatgtg
ccagcaagaaagttggggtttggtcttgttggctctggaaaacgtacagctgtcccttct
gttttccatgttgaggatgatgatgatgccgacaaggataaaaagatgaggccgttggtt
cccattgattactcaactgaggaactgcaggcagcccaacctcatgtctctggggcaaac
cctccgaatttggctgcagcagcagaatttgcgaagcgtatttcaaatgttaattccaaa
gaagagaaatctgatgcagaaagagaaagaagtagacgcttgcacgataggtcaagccag
agggagaaggaccggagtgatgaggataataatcgcaccagagatgagcacaaagagaag
attcttgacagggacagagatcgggaacatggtttggataaagtgaagacgccagataac
aagaaacttttggatgcaaaacaattgattgatatgatccctaagacaaaggaggagttg
ttctcatatgagataaattgggccgtgtacgacaagcatgagctgcatgagagaatgaga
ccgtggatttcaaagaagattacagagtttctcggagaagaagaaactactttggtagac
tatattgtatccagtactcaagaccatgtgaaggcatcccaaatgttggagttgctacaa
actattttagacgatgaagctgaaatgtttgtccttaagatgtggaggatgctcatcttt
gaaatcaagaaggtagagacgggtcttgcgttgagatcaaaatcctaa
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