Citrus sinensis (Valencia orange): 102609776
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Entry
102609776 CDS
T02983
Name
(RefSeq) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit00040
Pentose and glucuronate interconversions
cit01100
Metabolic pathways
Module
cit_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
102609776
Enzymes [BR:
cit01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
102609776
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Beta_helix
Motif
Other DBs
NCBI-GeneID:
102609776
NCBI-ProteinID:
XP_024956287
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All DBs
Position
4:join(29243280..29243546,29243643..29243774,29243882..29244049,29244167..29244187,29244322..29244529,29244644..29244725,29244835..29244943,29245247..29245363,29245468..29245689)
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AA seq
441 aa
AA seq
DB search
MHPQRQYWLPIFLAMLVSFFSFSFSSYQGDRFVTTRDQYQRFGSPIGVDSESETTLTRLY
GRASAPASPTKFVNVDDFEAKADGTDDSKAFMEAWEEACSSENEAVLVVPNNKIYHLKPI
TFSGPCKSDLTMKIYGTIKASVRLSDYSRDPRHWLVFENVNNFRVEGGGTIDGNGKVWWR
KSCKVNKSLPCNDAPTAVTFYGCKNVRVSSLRFRNSQKMHLTFQYCVNVRALNLLVIAPG
NSPNTDGIHVTGTQNILIKNCVIRTGDDCISIVSGSKNVRATDIICGPGHGISIGSLGAG
NSEAFVSNVLVNRARLSGTTNGVRIKTWQGGSGFAKDILFQNVEMRNVSNPIIIDQHYCD
QEKPCQEQASAVQVSNVVYQNIKGTSASEVAIKLDCSNQFPCRGLVLQDVILRLEEEDDI
AKASCSNVRLSPPGNFLPRCI
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgcacccacaaaggcaatattggttacctatattcttggctatgttagtctcttttttc
tccttcagttttagcagctatcaaggtgaccgatttgtcacaactcgtgatcaataccag
agatttgggagcccaatcggggtcgattcggagtctgaaacgactttgacgaggctgtac
ggtcgtgcaagtgctcctgcttctccaacaaagtttgtgaatgtggacgattttgaagcg
aaagctgatggaactgatgactctaaggcatttatggaagcttgggaggaggcttgttct
tctgaaaatgaagctgttttagtcgtccccaacaacaaaatctatcatcttaagccaatt
acattctcaggtccctgcaaatctgatcttacaatgaagatttatggaacaatcaaagca
tctgttcgtttatcagactatagcagagatccaaggcattggcttgtgttcgaaaatgtc
aacaatttcagagtcgaaggtggtggcacaatcgacggcaatggaaaagtttggtggaga
aaatcttgcaaagtcaacaaatccctcccgtgcaacgacgcaccaacggcagtaacattt
tacggatgcaaaaacgtgagagtgtcaagcctgaggttccgaaattcacaaaaaatgcat
ctcacgtttcaatactgtgtcaatgtcagagctttgaatctcctggtaattgcaccgggg
aacagccctaacaccgacggaattcacgtcaccggaactcaaaatattcttataaaaaac
tgcgtcattaggacaggtgatgactgtatctcaatagtaagcggatcgaaaaatgttcga
gctaccgatattatttgcggtccgggccacggaatcagtatcggaagcttgggagccgga
aattcagaagctttcgtgtcaaatgtgttggtgaatagagcaagactttcaggaaccact
aatggagtgagaataaagacctggcagggaggatctggctttgctaaagatatactgttt
caaaatgttgaaatgcgcaacgtgagcaatccaataattatcgatcaacattattgcgac
caagaaaaaccgtgccaagaacaggcctcggcggtgcaagtaagcaacgttgtgtaccaa
aacataaaaggaacgagtgcttctgaagtagcaattaaacttgactgtagcaaccaattc
ccttgccgaggactcgtgttacaagatgtaattcttcgacttgaagaagaagatgacatc
gccaaagcttcgtgttcgaatgttagattatctcctccagggaatttcttgcctcgttgc
atttag
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