KEGG   Citrus sinensis (Valencia orange): 102610032
Entry
102610032         CDS       T02983                                 
Name
(RefSeq) ATP-dependent helicase BRM isoform X1
  KO
K11647  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
cit  Citrus sinensis (Valencia orange)
Pathway
cit03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:cit00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    102610032
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cit03021]
    102610032
   03036 Chromosome and associated proteins [BR:cit03036]
    102610032
Transcription machinery [BR:cit03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     102610032
Chromosome and associated proteins [BR:cit03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    REST complex
     102610032
  Chromatin remodeling factors
   BAF complex
    102610032
   PBAF complex
    102610032
   GBAF(ncBAF) complex
    102610032
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII DEAD QLQ HDA2-3 Bromodomain AAA_14
Other DBs
NCBI-GeneID: 102610032
NCBI-ProteinID: XP_006491141
LinkDB
Position
3:complement(join(50144278..50144922,50145159..50145410,50146596..50147138,50147221..50148774,50149098..50149340,50149438..50149641,50149725..50149808,50149883..50149975,50150261..50150347,50150469..50150556,50150888..50151000,50151405..50152742,50152861..50154186,50155363..50155515))
AA seq 2240 aa
MQSGGGPSRNRAASTSSAASPSSSSSAVSTPHLGFDSLQQQQQHQQQQQRQPFQQQILRK
PDGNEAILAYQVGSLPGLMGGGNFASPPGSMQPPQQSRKFFDFAQQHAISQESQNRSQGV
EHQLLNPVHQAYMQYALQAQQKSASVLQSQQQAKLGMLGPASGKDQDMRMGNLKMQELIS
MQSANQAQASSSKNSSEQFGRGEKQMEQPQQQVSDQKGEPKPPSQQTLGGQGMAANIIRP
MQAAQHQQSIQNAAGNQLAMAAQLQAWALERNIDLSQPANASLIAQLIPIMQSRIVANHK
ANESNMGAPSSPVPVSKQQVTSPTIAGENSPHANSSSDVSGQSGSAKARPTVSPSPLGST
TSAAVVNNVNNISLQQFSVHGRDNQVPSRQPVAIGNGLPPIHPPQTSLNMTPGVDQPLPV
KNSSGPENSQMQYLRQLNRSSPQSAIPSSDGSSANNFSSQGGLATQMPQQRLGFTKHQLH
VLKAQILAFRRLKKGEGTLPQELLRAIVPPSLELQQQPAQQQFLPAAVNNQDRVSGKIAE
DQLRHLESNGKDAQAVSSSNVQSLPKEEAYAGDDKAAVSPVGQGMSAVTKEPAPVVVPGK
EEQQAPVSSVKSDQEVECGLLRTQQQSDFPADRGKSVAPQVSACDAVQVKKPAQATTALQ
PKDVGAARKYHGPLFDFPFFTRKHDSVGSTAMVNSSNNLTLAYDVKDLLSEEGLEVLQKK
RSENLKKISGILAVNLERKRIRPDLVLRLQIEQKKLRLLDLQSRLRDEVDQQQQEIMAMP
DRQYRKFVRLCERQRVELMRQVQTSQKAMREKQLKSISQWRKKLLEAHWAIRDARTARNR
GVAKYHERILREFSKRKDDDRNKRMEALKNNDVERYREMLLEQQTSIPGDAAERYAVLSS
FLTQTEEYLYKLGSKITAAKNQQEVEEAANAAAAAARLQGLSEEEVRSAAACAGEEVMIR
NRFLEMNAPRDGSSVNKYYSLAHAVNERVMRQPSMLRAGTLRDYQIVGLQWMLSLYNNKL
NGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHKWLPSVSCIY
YVGAKDQRSRLFSQEVAALKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESV
LARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPT
HNADDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIY
DWIKATGTLRVDPEDEKRRVQKNPIYQAKVYKTLNNRCMELRKTCNHPLLNYPYFSDLSK
DFLVKSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSL
EDRESAIVDFNSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHR
IGQKREVKVIYMEAVVDKISSHQKEDELRSGGTVDLEDDLAGKDRYIGSIEGLIRNNIQQ
YKIDMADEVINAGRFDQRTTHEERRMTLETLLHDEERYQETVHDVPSLQEVNRMIARSED
EVELFDQMDEEFGWIEEMTRYDQVPKWLRASTKEVNATIANLSKKPSKNILFGSNIGVDS
GEIETERKRGPKGKKYPNYKEVDDEIGEYSEASSDERNGYPVQEEEGEIGEFEDDEYSGA
VGAPPSNKDQSEEDGPVCEGGYDYLRPSENTRNNHVVEEAGSSGSSSNSRRLTQIVSPVS
PQKFGSLSALEARPGSLSKRMPDELEEGEIAVSGDSHMDHQQSGSWTHDRDEGEDEQVLQ
PKIKRKRSIRVRPRHTVERPEERSCTDTPLHRGDSSLLPFQMDNKYPAQLRTDTEMKAHG
ESNSLRHDQSEPSSKSRRNLPSRKIANAPKSRASLKTGRLNCMPGHTEDAADHFKESWDG
KIANASGSSNFSAKMSDVIQRRCKNVISKLQRRIEKEGHQIVPLLTDLWKRIETSGYVSG
AGNNILDLRKIDQRVDRLEYNGVMELVSDVQFMLKGAMQFYGFSHEVRSEARKVHDLFFD
LLKIAFPDTDFREARSALSFTGPLSTSVSTPSPRQTTVGQSKRHKIINEMEPGPSPPQKP
PQRGSVPVSEDSRIRVQIPQKESRLGSGSGSSREQSQPDDSPHPGELVICKKKRKDREKS
VVKPRSVSGPVSPPSLGRNIKSPGLGLVPKDMRHTQQTTHQHGWANQPAQPANGGSGAVG
WANPVKRLRTDAGKRRPSQL
NT seq 6723 nt   +upstreamnt  +downstreamnt
atgcaatcgggtggtgggcccagccggaaccgggcggcatctacgtcgtcagcggcgtcg
ccgtcttcgtcatcatctgctgtttcgacgccccacttgggttttgattcgttgcagcaa
cagcagcaacaccaacaacagcagcagagacagcctttccaacaacaaatactaagaaaa
cctgatggaaatgaagccattttagcatatcaagttggaagtctccctggattaatggga
ggggggaattttgcttcacctccaggctccatgcaacctcctcagcaatctaggaaattc
tttgattttgctcaacaacatgctatatcgcaggagagtcagaatagaagtcaaggtgtt
gagcaccaactgctaaatcccgttcatcaagcttatatgcaatatgctttgcaggcccaa
cagaagtctgcttcagttttgcagtctcagcagcaagctaaattgggaatgttgggtcct
gcatctgggaaagatcaagacatgaggatgggaaatttgaaaatgcaggaattgatctcc
atgcaatcagctaatcaggctcaggcatcatcgtccaaaaattcatctgaacagtttggt
cgtggtgaaaagcagatggaacaacctcagcagcaagtctctgaccagaagggtgaacca
aaacctcctagtcagcagacccttggtgggcaaggaatggctgctaatattataaggccc
atgcaggcagcacaacatcagcaaagcattcaaaacgcagccggtaaccaacttgcaatg
gctgctcagttgcaggcatgggcacttgagcgcaatattgatctctcacagcctgcaaat
gccagcttaatagcacagcttataccaatcatgcagtctagaattgttgctaatcacaaa
gcaaatgaaagcaacatgggtgcgccgtcatcacctgtcccagtatcaaagcaacaggtg
acatctccaaccattgcaggcgagaactctccacatgctaattcatccagtgatgtgtct
gggcaatctggttcagcgaaggcaagacctacagtttcccctagtcctcttggctcaact
accagtgcggctgtcgtcaataatgtaaacaacatttcattgcagcagttttctgttcat
ggcagagataaccaggttccttctagacagccggttgcaattggaaatggattgcctccg
atacatcctccacagacatctttgaacatgacaccgggtgtggatcagcctttgcctgta
aaaaattcaagtggcccagaaaattcacaaatgcagtacctcaggcagttgaatcgatct
tcaccgcaatctgcaattccttccagtgatggaagctcagctaacaacttttcgtcacag
ggtgggctggccacccagatgccacagcagcgtttagggttcacaaaacatcaacttcat
gttcttaaggcacaaattctagcatttaggaggctgaagaaaggagaaggtactcttcca
caagagcttcttcgagctattgttccaccgtctcttgagttgcagcagcagccggcacag
cagcaatttcttcctgcagcagtaaataatcaggatagagtttctgggaagattgcagaa
gaccagttgagacatttggaatctaatggaaaggatgcacaagctgtgtcatcatcaaat
gttcaaagcttaccaaaagaagaagcttatgctggggatgataaagcagctgtgtcacca
gttgggcagggtatgtcggctgtgacaaaggaacctgcacctgtggtagtaccaggaaaa
gaagagcagcaggcccctgtatcttcagttaagtcagaccaggaagtagaatgtggtctt
ctgcgaactcaacaacaaagtgatttcccagctgatagaggaaagtctgttgcacctcag
gtttctgcatgtgacgcagttcaagttaagaagccagcacaagcaactactgccctccag
ccaaaagatgttggcgctgccagaaagtatcatggaccactatttgattttccctttttc
actagaaaacatgactctgttgggtcgacagcaatggttaatagtagtaataatctaaca
ttggcatatgatgtcaaagatctactttctgaggaaggcttggaagttctccaaaagaaa
agatcagaaaatttgaagaagattagtggcatattggcagttaatttagagagaaaaaga
atcaggccagatcttgttctgcggttgcagattgaacaaaaaaagcttagacttttagat
ctacagtcacgtttaagggatgaagttgaccaacaacagcaggagattatggcaatgcct
gacagacaatataggaagtttgtccggctgtgtgagcgtcagcgtgttgaactgatgaga
caagtacaaacatctcagaaggccatgagagagaagcaattaaaatccatctcacagtgg
cgtaaaaagcttcttgaggctcattgggccatccgtgatgcacggactgcccggaatcgg
ggagttgccaaataccatgagagaattttgagggagttctcgaagagaaaggatgatgat
cggaacaaaaggatggaagccttgaagaataatgatgttgagaggtatagggagatgttg
ctagagcagcagactagtatcccgggtgatgctgcagaaagatatgcagtcctctcgtca
ttcttgactcagactgaagaatatctttataaactgggaagtaaaataaccgctgccaag
aatcagcaggaagttgaagaggcagcaaatgctgctgctgctgctgcaagattgcagggt
ctttctgaagaagaggttaggtcggcagcagcttgtgctggtgaggaagtgatgatcaga
aatagatttctggaaatgaatgcccccagggatggttcatccgttaacaagtattatagt
cttgctcatgctgtgaacgaaagggtcatgaggcaaccctcaatgttacgagccggaacc
ttacgagattatcagattgttggattgcagtggatgctttctttgtataacaacaaatta
aatggaatattggcagatgagatggggcttgggaagactgtgcaggtgatggcactgata
gcttatttgatggaatttaaagggaactatggccctcatcttataattgtccctaatgct
gtattggtgaattggaagagtgagttgcataagtggctgccatctgtatcatgcatttat
tatgttggtgcaaaggatcaacggtcaaggttgttttctcaggaggtcgctgccctgaaa
tttaatgtccttgtgacaacttatgagttcatcatgtatgaccgctcaaaactgtcaaaa
gttgattggaagtatatcataattgatgaagcacaaagaatgaaagacagagaatcagtt
ttggcccgtgaccttgatagatatcgttgccagaggcgcttgcttcttacagggacgcct
ttacagaatgatttaaaggaactttggtcactcttaaatctacttcttcctgaagtgttt
gataatcggaaagcattccatgattggttttcacaaccatttcaaaaggaaggtcctaca
cataatgcagatgatgactggcttgagactgaaaagaaagttatcattatccaccgactt
catcaaatattggagccttttatgctcagacgccgtgttgaagatgtcgaaggttccctt
ccacccaaggtctcaatagttttaaggtgtagaatgtcagctattcagagtgctatttat
gattggatcaaagccactggtactcttcgggttgatcctgaagatgagaagagaagggtt
caaaaaaatcccatataccaggccaaggtgtataaaactcttaataacagatgtatggag
cttcgtaaaacttgcaatcatcctttgctaaactatccatatttcagtgacttatccaaa
gattttcttgtaaaatcatgtgggaaattatggatcctggataggatccttataaaactt
cagagaacggggcatagagtactgctgtttagcaccatgaccaagcttcttgatatcctg
gaggaatatctacaatggcggcaacttgtgtacaggcgaattgatggaactactagttta
gaagatcgtgaatcagctattgtggactttaatagccatgattcagactgctttatattc
ctgcttagtattcgtgccgctggacgtggtcttaatcttcagtctgctgacacagtcatc
atttatgatcccgatcctaacccaaaaaatgaggaacaggcagttgctagagcccaccgc
attggacagaaaagagaagttaaggtcatttatatggaagcagttgttgacaaaatttcg
agtcaccaaaaagaggatgaactaagaagtggaggtacagttgatttagaggatgatctt
gcaggtaaggatcgatatattggatctattgagggcctcataaggaataacattcagcag
tataagattgacatggctgatgaggtcatcaatgctggacgatttgatcagagaacaact
catgaagagaggcgtatgactttggagacattattacatgatgaggaaaggtaccaagaa
actgtgcatgatgttccatcactgcaggaggtaaatcggatgattgctagaagtgaagat
gaagtagaattgtttgatcaaatggatgaagagtttggttggattgaggagatgacaaga
tatgaccaggtaccgaagtggcttcgagccagtacaaaggaagtgaatgctactattgct
aatttatccaaaaagccatcaaagaatattttgtttggtagcaatattggtgtggattct
ggtgaaattgaaacagaaagaaaaaggggacccaaggggaaaaagtatcctaattacaag
gaagttgatgatgaaattggagaatattctgaagcaagctctgatgagaggaatggatat
cctgtgcaggaagaagagggagaaattggagagtttgaagatgatgaatacagtggtgct
gttggggcaccaccgagtaacaaagaccaatcagaagaagatggtccagtttgcgaaggt
ggttatgactatctccggccttcagaaaacacaagaaacaatcatgtagttgaggaagct
ggttcttcaggatcatcttcgaacagtcgaagattgacacagatagtatctcctgtttcc
cctcagaaatttgggtctctgtctgcattagaagctaggccaggttctctttcaaagagg
atgccagatgagttagaagagggagagattgcagtatctggagattctcacatggaccac
cagcaatctggaagttggactcatgatcgtgacgaaggtgaagatgaacaggttttgcag
cctaagatcaaacgaaagcgtagtattcgagttcgaccccgtcatactgttgaaaggcca
gaggagaggtcttgcaccgacacacctctccatcgcggtgattcatctctcttgcccttc
caaatggacaacaaatatccagcacagttaaggactgatactgaaatgaaagcacacggg
gaatccaattctctcaggcatgatcaaagtgagccatcttcgaaaagtaggcggaactta
ccttcacggaaaatagctaatgccccaaagtcgcgtgcttcactgaaaactggtcgattg
aattgcatgcctggtcatacagaagatgctgctgatcacttcaaagaaagttgggatggg
aaaattgcgaatgctagtggttcctcaaattttagtgctaagatgtctgatgtcatccag
aggaggtgcaagaatgtaattagtaagctccaaaggagaatcgagaaagaagggcatcaa
attgtacccctgctaactgatttgtggaagagaattgaaacttctggttacgtgagtgga
gctggaaataatattttggatttacggaagattgatcagcgtgttgacaggctagagtat
aatggagtgatggagctggtgtctgatgtgcagtttatgttaaagggtgcaatgcagttt
tatggcttttcacatgaggttagatcagaagcaaggaaagttcatgatctgtttttcgat
ttattgaagattgcatttccggatacagattttcgagaagccagaagtgcactctctttc
actggcccactatctacctctgtctctacgccgtctccaagacaaaccactgttggccaa
agtaagaggcacaagataataaacgagatggaacctggtcctagtcctccccaaaagcca
ccacaacgtggatctgttcctgttagtgaagacagtaggattagagtccaaataccacag
aaggaatcaaggcttggaagtggaagtggcagtagtcgagagcaatctcagccggatgat
tctccacatccaggggagctggttatctgcaagaagaagagaaaagacagggaaaagtca
gtggtgaagccaagatctgtatctggccctgtctcaccacctagcttgggtcgtaatatc
aaaagtccaggtctaggtttggtacctaaggatatgcgtcatactcagcaaactacccac
cagcatgggtgggccaaccagcctgctcaaccagcaaatggtggtagcggggctgttggt
tgggcaaatcctgttaagaggttgagaacagatgctggcaaaaggcggccaagtcaatta
tga

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