Citrus sinensis (Valencia orange): 102610182
Help
Entry
102610182 CDS
T02983
Name
(RefSeq) amino acid transporter AVT1D isoform X1
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
102610182
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cit02000
]
102610182
Transporters [BR:
cit02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
102610182
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aa_trans
Trp_Tyr_perm
Motif
Other DBs
NCBI-GeneID:
102610182
NCBI-ProteinID:
XP_052299587
LinkDB
All DBs
Position
6:complement(join(14574132..14574224,14574353..14574415,14574512..14574555,14574676..14574841,14575014..14575149,14575357..14575576,14575678..14575858,14575962..14575985,14576116..14576330,14576530..14576849,14577407..14577600))
Genome browser
AA seq
551 aa
AA seq
DB search
MKMQDEDLGRERQAETLTDDEENQADSMGEIEDDSGSESSSTHSTPTRNPSDGIDIQPTW
PQSYRQSMDIYSTVTSPSLGFLKPSSLSALSGSMSSLYKRSQPASYLESSLSKPLISDLE
KEEVLSPRVHWNVPSRSRLSNISDMPRSRMSSISDSLPPARKCSLAQSCLNGINVLCGVG
LLATPYAIKEGGWSSLSLLFIFGIIAFYTGILLQECLDSAPGLTTYPDVGQAAFGITGRL
IVAIVLYLELFAASIEYLIMMSDNLASLFPHTSMNFGGLHLDCHKIFSITATLVVLPTVW
LRDLTLLSYISVGGVITTGVVVLCLLWIGLVDAVGFHPYGTALDLSNLPVTIGLYGFAYA
GHSVFPNIYSSMQEPKKFPFVLMISFVFCSLLNAGVGICGYLMFGDSIQSQFTLNFPKEF
VASKVAIWTTVLIPMSKYAMTLTPIALSLEELMPSKELQSYSVSVIIRTILAISTLVVAL
TLPYFGIVMSLIGSLLAMLITLIFPCVFYLKILQGKISKLKIAFCIFNAVLGVFCACIGT
YSALSRIATRV
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgcaagacgaggatttgggccgagagcgccaggctgaaacattgacggatgat
gaagaaaatcaggcggatagcatgggtgaaatcgaggacgattcaggatctgaaagctca
tcaacgcactccactcccacaagaaatccttctgatggcatcgacatacaacccacttgg
ccccagagctaccggcaatcaatggacatttattcaactgtcacctctccttcgcttggt
ttccttaaaccgtcaagtctgtcagcattaagcggttccatgtcttccttatacaagaga
agtcaacccgcttcttatttggaatcttccctcagtaaaccactcatttctgatttagaa
aaagaagaagtgctttcccctagagtccattggaacgtaccttcccgttcaagattatca
aatatcagcgacatgccacgttcaagaatgtcatctattagtgattcattaccaccggca
aggaagtgttcacttgctcaatcatgtcttaatggaatcaatgttctctgtggagtagga
ctccttgcaactccttacgcaatcaaagaaggagggtggtctagtctctcattgctcttc
atctttggcatcattgctttctatacagggattttattgcaggaatgtttagatagtgct
cctggacttacgacttaccctgatgttgggcaggctgcttttggcattaccggtcgcttg
attgtagctatagttttatatttggaattatttgccgctagtattgaataccttattatg
atgagtgataacttagcatcattgtttccacacaccagcatgaattttggtggactacat
ctggattgtcataaaatcttttccattacggcgactcttgtcgtacttccaactgtttgg
cttcgagatcttactttactctcttatatctcagttggaggagtgattacaacaggtgtg
gtggttctttgcttgttatggattggtttggtggatgcggttggatttcatccctacgga
acagctctcgacctttcaaatctgcctgtcacaattggtttatatggatttgcctatgcc
ggccattcagtttttccaaatatatattcttcaatgcaagaacccaaaaaatttccattt
gttcttatgatcagctttgttttctgttcccttctgaatgccggcgtaggaatctgtggc
tacctgatgtttggtgattcaattcagtctcaattcactttaaattttcccaaagaattt
gtagcttccaaagttgcaatctggacaacggttttgatcccaatgtcaaagtatgccatg
acgcttacaccaattgcattaagtttagaggaactcatgccttcaaaggagcttcaatct
tacagtgtatcagtaatcatcagaacaattttagctatttcaacattagttgtggctctc
acacttccttacttcggtattgtgatgtcactaatcggatctttactcgcaatgctaatt
actcttatattcccatgtgtattttacctcaaaatactccagggtaaaataagtaagttg
aagattgcattttgcattttcaatgcagttttgggagtattttgtgcttgcattggcaca
tattcagcactttcaagaatagccaccagggtctga
DBGET
integrated database retrieval system
