Citrus sinensis (Valencia orange): 102610204
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Entry
102610204 CDS
T02983
Name
(RefSeq) protein PAF1 homolog isoform X1
KO
K15174
RNA polymerase II-associated factor 1
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cit03021
]
102610204
Transcription machinery [BR:
cit03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
102610204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Paf1
Motif
Other DBs
NCBI-GeneID:
102610204
NCBI-ProteinID:
XP_024957201
LinkDB
All DBs
Position
7:complement(join(8680853..8680996,8681122..8681265,8681352..8681423,8681509..8681577,8681697..8681783,8682250..8682355,8682846..8682965,8683071..8683147,8683236..8683416,8683511..8683618,8684112..8684180,8684533..8685389))
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AA seq
677 aa
AA seq
DB search
MASYRPFPQPPQSSFPPPPPPNQNPSQPPPPPQQQQQQQRPNPYSQNWGGYSNTGGGAQQ
HYHQPYSYAQPPPPPPPESSYPPPPPPPPPPPPTQQQTQPSMYYSSNQYNQNSMYPPMQP
PLPPPPPSSPPPSSSIPPPPPPGSPPPPPPKDVEGRDTGTSDRDKRASKEVSRHDPGHSK
QHRPPVPPPGVKKVNGGSGRVETEEERRIRKKREYEKHRQEEKHRLQMKESQNVVMQKSQ
MVASGKGGHGSMVGSRMGDRRAAPLLSGERTENRLKKPTTFLCKLKFRNELPEPSAQPKL
MALKKDKDRFTRYTFSSLEKNYKPQLHVEPDLGIPLDLLDLSVYNPPSVRPPLDPEDEEL
LRDDEVVTPVKKDGIKRKERPTDKGVSWLVKTQYISPLSMESARQSLTEKQAKELREMKG
GRSILENLNDRERQIKEIEASFEACKLRPIHATNKNLQPVEILPLLPDFERYDDQFVAAT
FDGAPTADSEIYSKMDKSVRDAHESRAIMKSYVATGSDSANPEKFLAYMVPSVNELSKDM
YDENEDVSFSWVREYHWDVRGDDADDPTTYLVSFDDDEARYVPLPTKLNLRKKRAIEGRS
NDEVEHFPIPSSIAVRRRANVTAIELKEQGAYSNSKGNSSSSKMGRVDSQEDLERSHNGS
RQQDPYQSSGAEDDMYD
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggcctcttacaggccattcccacaaccaccgcaatcgtcattcccgccaccacctcct
ccaaaccaaaacccttcacagccaccgccgccacctcaacagcaacaacaacaacaaagg
ccaaacccttactctcaaaactggggtggttatagtaatactggtggtggtgctcagcaa
cattatcaccaaccatactcatatgcacaaccgccaccacccccgccaccggaatcttca
tacccacctccgcctccccctccccctccaccaccaccaacccaacaacagacacaacct
tcaatgtattattcaagtaatcagtataatcaaaattcaatgtatccaccaatgcagcca
ccacttccacctccaccaccttcgtctccgccacccagctcgtcaatcccacccccgcca
cctcctggttctcccccgcctcctccgccgaaggacgttgaggggagagatactggaacg
agtgatcgcgataagagggcatctaaggaggtttctaggcatgatcctggtcattcgaag
caacacaggccaccagttccaccacctggggtgaagaaggtgaatgggggttcagggagg
gtggagacagaggaggagaggcggataaggaagaagagggagtatgagaagcataggcag
gaggaaaagcataggctacaaatgaaggagtctcagaatgtggttatgcagaagagtcag
atggtggcttctgggaaaggagggcatgggtcaatggtagggtcaaggatgggggataga
agagctgcaccgcttttgagtggtgagaggactgagaataggttgaagaagccaaccacg
ttcttgtgcaagttgaaatttcgaaatgaacttcctgagccaagtgcacagccaaagctt
atggcgctgaagaaagataaagatcgttttacaagatacacattctcatcgttggagaaa
aattacaagccccaactacatgttgagccagatctcgggataccacttgacctacttgac
cttagtgtatacaaccctcccagtgttagaccacctcttgatccagaggatgaggaattg
ttgcgagatgatgaagtagttaccccagtgaaaaaagatggtataaaaagaaaagaacga
cctacggataaaggtgtttcttggctagtcaaaacgcagtatatatctcctcttagcatg
gaatcagcaagacagtctttgactgaaaaacaagcaaaagaactgcgagaaatgaagggg
ggccgtagcatattggaaaaccttaatgatagggagagacaaattaaggaaattgaggct
tcctttgaggcatgcaagttgcgtcctattcacgcaaccaataaaaatttacagcctgtt
gagattttgcctctgttacctgattttgagcgatatgatgatcaatttgttgcagcgaca
tttgatggtgctcccacagcggattctgaaatctacagcaagatggacaaatctgttcga
gatgcccacgaatcacgggctattatgaaaagttatgtggcaacaggctcagattctgct
aacccagagaaattcttggcgtatatggtcccttctgtaaatgagctatcaaaggatatg
tatgatgagaatgaagacgtctcattttcttgggttcgcgagtaccactgggatgtgcgg
ggtgatgatgcagatgacccaaccacataccttgtttcgtttgatgatgatgaagctcgc
tacgtgcctctgcccacaaagcttaatttgaggaagaagagggcaatagagggaagatct
aatgacgaagtcgaacattttcccattccttcaagtattgctgtaaggcgaagagcgaat
gtaactgcaatagaattgaaggagcaaggggcttattcaaattcaaagggtaacagttcg
agttcaaagatgggaagggtagattcccaagaggatcttgaaagatcacataatggttca
cggcaacaagacccctatcaatcaagtggagcagaagatgacatgtatgattga
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