Citrus sinensis (Valencia orange): 102610327
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Entry
102610327 CDS
T02983
Name
(RefSeq) upstream activation factor subunit spp27-like isoform X1
KO
K15223
upstream activation factor subunit UAF30
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cit03021
]
102610327
Transcription machinery [BR:
cit03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
102610327
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
DEK_C
PTPRCAP
PGA2
Drc1-Sld2
Motif
Other DBs
NCBI-GeneID:
102610327
NCBI-ProteinID:
XP_006466650
LinkDB
All DBs
Position
7:join(3130304..3130677,3132704..3132818,3132920..3133094,3133247..3133303,3133585..3133760,3134387..3134506)
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AA seq
338 aa
AA seq
DB search
MVSDSELIARLQEFLKNSDLNTTTTGIVRRQLEKDFGVDLTDKKIFIREQVDLFLQSQFE
NDQNDGGNEEQQQEDDGEDDQMAKVKSDETDGSDDAAVEEGDDDNNDENDNDDEANEAKG
PAKRRSRKLNNEVKKRGGGFSKLCALSPQLQEFIGVTELARTEVVKQLWAYIREKDLQDP
NNRRNIVCDERLRALFGVDTINMFQMNKALSKHIWPLDSDDVISVKSTPKEKQRKQERTE
DLDEPTRKEKRQKGGKSGFLAPLQLSGALIKFLGTGESALPRSDVIKRMWDYIKEKNLQD
PSDKRRIICDEKLKELFDVETFNGFTVTKLLAVHFLKT
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggtatcggactcggagcttatcgcgagactgcaggagttcctcaaaaactcggacctg
aacaccaccaccacaggtatcgtgcgccggcaactagagaaagatttcggagttgatttg
acggataagaaaatatttattagagaacaggttgatttatttcttcaaagccagtttgag
aatgatcaaaacgacggtggaaacgaagaacaacaacaagaagatgatggtgaagatgat
cagatggcgaaggtgaaatctgatgaaacggatggttctgatgatgctgcagtggaggaa
ggtgacgatgataataatgacgaaaacgacaatgatgacgaggcgaatgaagcgaagggt
cccgcaaagagacggtctagaaagcttaataatgaggtcaagaaaagagggggtggtttt
agcaagttatgtgccctctctcctcaacttcaggaattcattggggtgactgaactggcc
aggactgaggttgtcaagcaactgtgggcctacattagagagaaggatttgcaagaccca
aataatagacgaaatattgtttgtgatgaacgattgcgtgccctttttggtgttgatacc
atcaacatgtttcaaatgaataaggccttatcaaagcatatatggcctttggattcagat
gatgttatttctgtcaagtcaacaccaaaggaaaaacaacgaaagcaagagagaacagaa
gatttagatgagccgactagaaaggaaaagagacagaagggaggaaaatctggttttctt
gcacctcttcaactttcaggtgctctaatcaagttccttggtactggagaaagtgcatta
ccaaggtctgatgttattaagagaatgtgggattacataaaggaaaagaacctccaggat
ccatctgacaagagaagaataatatgtgatgagaagctgaaagaactctttgatgtcgaa
accttcaatggcttcaccgttacaaaactcctagctgttcatttcttaaagacgtag
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