Citrus sinensis (Valencia orange): 102610438
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Entry
102610438 CDS
T02983
Name
(RefSeq) nuclear transcription factor Y subunit B-6 isoform X1
KO
K08065
nuclear transcription Y subunit beta
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cit03000
]
102610438
Transcription factors [BR:
cit03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
102610438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBFD_NFYB_HMF
Histone
TFIID-18kDa
Bromo_TP
CENP-T_C
TAF
Motif
Other DBs
NCBI-GeneID:
102610438
NCBI-ProteinID:
XP_015382122
UniProt:
A0A075BRW3
LinkDB
All DBs
Position
2:join(32680397..32680454,32681954..32682612)
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AA seq
238 aa
AA seq
DB search
MERTGGFRGYRQQLPNASRGPGLKFTETNIRLASAHEINQTNNNNHTNYEDNECTVREQD
RFMPIANVIRIMRKILPQHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTITAE
DVLWAMSKLGFDDYIEPLTVYLHRYREMEGERGSIRGEPPLVKRPPVEFRTLGVAAFAAP
AAAFHHMGLGRGHGFLGAATAAAATGTYFNNNDPSNNNTAAGSSQPAVANGETYAHNK
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atggaaagaactggaggcttccgtggctaccgccagcagctccccaacgcaagccgtggg
ccagggctgaagttcacagagacgaatatcagactagcatcggctcatgagattaatcaa
accaataataataaccacacaaattatgaagacaacgaatgcacagtgcgggaacaagac
cgtttcatgccaattgctaacgttataagaatcatgcgcaaaatccttccccagcatgcc
aaaatctcagacgacgcgaaggaaacaattcaagaatgcgtgtcggagtacatcagcttc
ataaccggcgaagccaacgagcgctgccagcgcgagcaacgcaagaccattaccgctgag
gacgtgctttgggcgatgagcaagctgggcttcgatgattacatcgagccgctcactgtt
tacctccaccgctaccgtgaaatggaaggggagcggggttcaatcaggggagagccgccg
ttggtcaagaggccgccggttgagtttcgtacactgggtgttgcagcatttgcggcccca
gcagcagctttccaccatatgggactgggacgtggacatggctttcttggagctgcaact
gctgctgctgccacggggacttacttcaacaacaacgatccttccaataataatactgcg
gcggggtcatcacagcctgccgttgctaatggtgaaacttatgctcacaacaaataa
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