KEGG   Citrus sinensis (Valencia orange): 102610451
Entry
102610451         CDS       T02983                                 
Name
(RefSeq) protein CHROMATIN REMODELING 5
  KO
K11367  chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
cit  Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:cit00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cit03021]
    102610451
   03036 Chromosome and associated proteins [BR:cit03036]
    102610451
Transcription machinery [BR:cit03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     102610451
Chromosome and associated proteins [BR:cit03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    SAGA complex
     102610451
    SLIK complex
     102610451
SSDB
Motif
Pfam: SNF2-rel_dom HTH_Hrp3 Helicase_C Chromo CHD1-like_C HDA2-3 ResIII DEAD Chromo_MIT1 SWI2_SNF2 OAM_alpha KH_PARP14_5
Other DBs
NCBI-GeneID: 102610451
NCBI-ProteinID: XP_006470732
LinkDB
Position
2:join(3800995..3801733,3801883..3801947,3803656..3804096,3804926..3805150,3805319..3805402,3806506..3806565,3806695..3806798,3807471..3807522,3807886..3807949,3808664..3808757,3808857..3808944,3809032..3809166,3809829..3810020,3810120..3810187,3811722..3811815,3811944..3812068,3812148..3812211,3812431..3812643,3813733..3813975,3814109..3814219,3814399..3814485,3814645..3814827,3814941..3815021,3815160..3815405,3817289..3817444,3817561..3817741,3817892..3818073,3818735..3819100,3819194..3819287,3819497..3819993)
AA seq 1777 aa
MAFFRNFTSEAVSQSILEDKAQGQSVGGISSVGNEEDVDGTYGERDFDINMDVQYQSDGE
PDDANRLQNEAAAVDHGGVRDLNMQPSGRRTALAGRWGSTFWKDCQPRGPNTAGSDSGQD
SKYEYKNMEGSYYNSSDEREDRLESQDEGQKPANKAAKGYSDVPADEMLSDEYYEQDGEE
QSDSMQYRGFSNSVGLNSRSQSKTVAVNSSVSRRSRALKRHKDVDDDDDDDNNNEDADYE
DEDEEEDDPDDADFEPDYGVTGSRPGNKDKDWDAEDSDEDDNSDDDLDVSDEDDFYSNKK
SKGRQRGVKVGRNVKPARERKSLYSSSRQRRGKPSFEEDDYSAEDSDSESDEDFKSITRR
GAQLRKGNARSTMSTKISGQNSEVRTSSRSVRKVSYVESDGSEELDEGKKKKPQKDEIEE
EDGDSIEKVLWHQPKGTAEDAAKNGRSKEPVLMSHLFDSEPDWNEMEFLIKWKGQSHLHC
QWKSFPELQNLSGFKKVLNYAKKVVEDVRFRKMVSREEIELNDVSKEMDLDIIKQNSQVE
RIIADRISKDSSGNVTQEYLVKWKGLSYAEATWEKDEIIDFAQDAIDEYKAREAAMAEQG
KMVDLQRKKGKASLRKLEEQPEWLRGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGK
TVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQ
QYEFYNDKKVGRPIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTL
SEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDFIQNYKNLSSFNENELANLH
MELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVS
LLNIVVELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHET
KHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLS
TRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDIL
ERAKKKMVLDHLVIQKLNAEGRLEKKETKKGSYFDKNELSAILRFGAEELFKEDRNDEES
KKRLLGMDIDEILERAEKVEEKEAEGEGGNELLSAFKVANFCGAEDDGSFWSRWIKPEAV
AQAEDALAPRAARNTKSYAEANEPERSNKRKKKGSELQEPQERVQKRRKAEFSVPSVPFI
DGASAQVRDWSYGNLSKRDATRFYRAVMKFGNQSQISLIARDAGGAVATAPQEVVVELFD
ILIDGCREAVEVGSPDPKGPPLLDFFGVSVKANDLINRVEELQLLAKRISRYEDPIKQFR
VLSYLKPSNWSKGCGWNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKIAPVELQHHE
TFLPRAPNLKERANALLEMELAAVGAKNANAKVGRKASKKGREKSENILNMPISRLRDKK
GKPGSAKVNFQSTKDRFHKPQRVEQPLTKEEGEMSDNEEVYEQFKEVKWMEWCEDVMADE
IRTLQRLQRLQATSDNLPKEKVLSKIRNYLQLIGRRIDQIVLEHEEELYKQDRMTMRLWN
YVSTFSNLSGEKLHQIYSKLKQERQEEAGIGHSHINGSASGSIDNDLNFSTFNRHAERQK
GHKNVSTYQMTEPIHKGIDPKKFEAWKRRRRAETDMYSQAQPMLQRPMNNGTRLPDPNSL
GILGAAPTDNRRFVTERRYPMRQTGFPPRQGFPSGIN
NT seq 5334 nt   +upstreamnt  +downstreamnt
atggctttttttaggaactttacaagtgaagcagtttcccagagcatcctggaagacaaa
gctcaaggacaaagtgttgggggcatcagttcagtagggaatgaggaggatgtagatggg
acttacggtgaacgagattttgatattaacatggatgtacagtatcaaagtgatggagaa
ccggatgatgctaatagactgcaaaatgaggctgccgctgttgaccatggtggcgtgagg
gatttaaacatgcagccctctggtaggagaactgccctggctgggagatggggttctaca
ttttggaaggactgccagcctaggggccccaacactgccgggtctgattctgggcaggat
tcgaaatatgaatataaaaatatggaagggtcttactataattcatcagatgaaagggaa
gatagattagagtctcaagatgagggccaaaaaccagctaacaaggctgcaaagggttac
tcagatgttcctgcagatgagatgttgtctgatgagtactatgagcaggatggggaagaa
caaagtgactcaatgcagtatagagggtttagcaattctgttgggttgaactctagatcc
cagtcaaagactgtagccgttaatagcagtgtgtctaggagatcaagagctttaaagagg
cataaagatgtcgatgatgatgacgatgatgataataataatgaggatgctgattatgaa
gacgaggatgaggaagaagatgaccctgatgatgcagattttgagcctgattacggagtt
actggcagtcgcccaggcaacaaggataaagattgggatgcagaagattctgatgaagat
gataatagtgatgatgatctagatgtctcagatgaagatgatttttattctaataagaaa
tctaagggcagacaaagaggagttaaagttggtcgtaatgtaaaacctgctagagaacgc
aaatcattgtattcatccagtcgacaaaggagaggaaaaccatcatttgaagaggacgat
tattctgcagaggattctgacagtgagagtgatgaggactttaagagcataaccaggaga
ggtgcacaactacgtaaaggtaatgctcgatccacaatgtcgacaaaaatcagtggacaa
aacagtgaggttcgcacttctagtaggtcagttcgtaaggtatcatatgttgaaagtgat
ggaagtgaagaacttgatgaaggcaagaaaaagaagccccaaaaggatgagattgaagag
gaagatggtgattccattgaaaaggtgctttggcatcagccaaagggcacggctgaagat
gctgcaaagaatggtagatcaaaggaacctgttctgatgagtcacttgtttgattctgaa
ccagattggaatgagatggaattcttgataaaatggaaaggccagtcacatttgcattgt
cagtggaaatcatttcctgagctacaaaatcttagtggttttaagaaggttttgaattat
gcaaagaaagtagtggaggatgtgaggttccggaagatggtctctcgtgaggagatagaa
ttgaatgatgtcagtaaggaaatggacttagatatcatcaagcaaaacagtcaggttgag
agaataattgctgatcgaattagtaaagatagctcgggtaatgtgacgcaggagtattta
gtcaaatggaaaggcctttcgtatgctgaagcaacatgggagaaggacgaaattattgat
tttgctcaagatgctattgatgagtacaaggctcgtgaggctgcaatggctgaacaaggg
aaaatggtagatctccagcgtaagaaaggcaaagcgagtttacggaagcttgaggaacaa
cctgaatggttaagaggaggaaagcttcgtgactatcagcttgagggtctaaactttctt
gtgaacagttggcgaaatgataccaatgtcattttagctgatgaaatgggtcttggaaaa
acagtccagtcagtgtcaatgcttggtttcttacagaacgctcaacaaattcctggtcca
tttcttgtagttgtaccattatccaccttgtcaaactgggcgaaagagtttagaaaatgg
cttcctaccatgaatgtgattgtatatgttggtacacgtgcaagccgagaggtttgtcag
caatatgaattttataatgacaagaaagtcggcaggcctataaaatttaatacactgtta
accacatatgaagttgtcctgaaggacaaggctgttctgtccaagataaagtggaactat
ttgatggttgatgaagctcataggttaaagaacagtgaagcacagttgtatacaactctc
tcggaatttagcactaagaacaagttacttattactggcacacccttgcaaaacagtgtg
gaagagctatgggctctgcttcacttccttgatcatgacaagtttaagagtaaggatgat
ttcattcaaaattacaagaatctcagttcattcaatgaaaatgagcttgcaaatcttcat
atggaattgaggccgcacattcttcggagaattataaaagacgtggagaagtctttgcct
ccgaaaattgaacgtattcttagagttgagatgtcccctcttcaaaagcagtactacaag
tggattttggaacgcaacttccacgacttgaacaaaggagttcgtgggaatcaagtttca
cttctgaatattgtggtagagttaaagaaatgttgcaaccatcccttcctttttgagagt
gcagaccatggttatggtggggacaccagcatcaatgataccagcaaactggagagaatt
attttgagcagtgggaagctagtgatactggacaagctacttgtgaggttgcatgagaca
aaacatcgtgttctgatcttttctcagatggttagaatgttggatatactagctgagtat
atgtcgtataaaggtttccagtttcaaaggcttgatggtagtacaaaggctgagttgcgc
caccaagctatggatcattttaatgcacctggtagtgaggatttctgtttcttgctttca
actcgagctggtggtcttggtatcaatcttgcaacagctgacactgttataatatttgat
tccgactggaatcctcaaaatgacttgcaggctatgagtagagctcatagaattggacag
caagaagttgtcaacatctatagatttgttacaagcaaaagtgtcgaggaggatatcctg
gaacgtgctaagaaaaagatggttcttgatcatttggtgatccaaaagttgaatgctgag
ggtagactggagaagaaagaaacaaagaaagggagttattttgataaaaatgaactttcg
gcaattttgagattcggagcagaggaactttttaaagaggacagaaacgatgaggagagc
aaaaaaagactgttaggcatggatattgatgaaatacttgaaagagcagagaaagttgag
gagaaggaagctgaaggagaaggagggaatgaattgttgagtgcttttaaggttgccaat
ttctgtggtgctgaagatgatggtagtttctggagtcgttggattaaacctgaagctgta
gctcaagctgaggatgctttagctcctcgtgctgcaaggaataccaaaagctatgctgaa
gcaaatgaacccgagagaagtaataaaaggaagaagaaaggatctgagcttcaggagcct
caggagagagttcagaagcgccgcaaagcagaattttcggttccatctgttccatttatt
gatggagcatctgctcaagtgagagactggtcatatgggaatctatccaagagagatgcc
acgcgtttttatcgtgcggttatgaaattcggaaaccagagtcaaatcagcttaatagct
cgagatgctggtggtgcagttgcaacagctccacaagaagtggtggttgaactttttgat
attttaattgatgggtgtagagaagcagttgaagtaggaagtccggacccaaagggccct
cctttgctggatttttttggtgtctctgtgaaggctaatgatctaattaaccgtgttgaa
gaacttcaacttctagcaaagcgtataagtcgctatgaagatcctattaagcaattccga
gtgttgtcatatcttaaaccgtcaaattggtccaaaggttgcggctggaatcagtttgat
gatgcaagattgcttctgggaatacactaccatggtttcggcaattgggaaaacataagg
ttagatgagaggcttggccttacgaagaagattgctcctgttgaacttcaacatcatgag
accttccttccacgtgcaccaaatttgaaggagcgtgctaatgcacttttggaaatggaa
cttgcagctgttggtgcaaagaatgcgaatgctaaagtgggacgtaaggcttccaagaag
ggcagagagaaatctgagaatattttgaacatgccaatatctcgcttgagggacaagaaa
ggaaaacctggttctgctaaggtcaatttccaatctaccaaagatagatttcataaacct
caaagagttgaacaacctttaacaaaagaggagggtgaaatgtcggacaacgaggaagta
tatgaacaatttaaggaagtgaaatggatggaatggtgtgaagatgtcatggctgatgaa
attagaaccctgcagcgccttcaacgattgcaagctaccagtgacaatcttccaaaggaa
aaggtgctttcaaaaattcggaattacttgcagcttatagggcgaaggatagaccaaatt
gtcttagaacatgaggaggaactatataagcaagataggatgactatgcgattatggaac
tacgtctctactttttcaaatctttctggggagaaactgcatcagatttattccaaactc
aagcaggagcggcaagaggaagcagggattggacattcccacattaatggctctgcttct
ggttctattgataatgatctaaatttttctacattcaaccgccatgctgagaggcaaaag
ggacataaaaatgtgtctacttatcaaatgacagaaccaattcacaaaggcattgatcca
aaaaagtttgaagcatggaaacgaaggagaagggcagaaacggatatgtattcccaagct
cagcccatgttgcaaagacctatgaataatggcactcgtctaccagatccaaactcgtta
ggaattcttggtgcggcaccaactgacaacaggcgttttgttactgagaggcgctaccca
atgcgtcaaaccggctttcctcctagacagggtttcccgtctggcatcaattag

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