Citrus sinensis (Valencia orange): 102610491
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Entry
102610491 CDS
T02983
Name
(RefSeq) U1 small nuclear ribonucleoprotein A
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102610491
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cit03041
]
102610491
Spliceosome [BR:
cit03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
102610491
Complex B
102610491
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
RRM_YTH1
xRRM
DUF4523
Motif
Other DBs
NCBI-GeneID:
102610491
NCBI-ProteinID:
XP_006479987
UniProt:
A0A067H5T2
LinkDB
All DBs
Position
3:complement(join(45402146..45402436,45402608..45402696,45402981..45403074,45404196..45404368,45404482..45404572))
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AA seq
245 aa
AA seq
DB search
MEPEVANQGNEISPNNTIYINNLNEKVKIDQLKQSLHAVFKQFGTILEILAFKTLKHKGQ
AWLVFKDVASATAAVEKMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRERRKRHEEKG
KKRKDQHDANQAGMGLNPAYAGAYGATPPLSQIPYPGGAKSVIPEAPAPPNNILFVQNVP
HDTTPMALQMFFSQFPGFKEVRMVEAKPGIAFVEYGDEMQATVAMQSLQSLKIGQQQLLI
TYAKK
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggagccggaggtggcaaatcaaggcaacgaaatttctccaaacaatactatatacatc
aacaatctcaacgagaaagtcaaaatcgaccagttgaagcagtcgctgcacgcagttttc
aagcaattcgggacgatattggagattttagcattcaagacgctgaaacacaaaggccaa
gcttggctcgttttcaaagatgtcgcatccgccactgcagctgttgagaagatgcagggc
ttcccattttacgacaagcctatgagaatacaatatgcaaaaacaaaatcagatataata
gccaaagcagatggtacctttgttccacgtgaaagacgaaaacggcacgaggaaaagggt
aaaaagcggaaagaccaacatgatgctaatcaagcaggaatgggtctgaatcctgcatat
gctggtgcctacggtgcaacacctcctctatcacaaataccctatccaggtggtgcaaaa
tctgtgatccccgaggctccagctccacctaataacatcctatttgttcagaatgttccc
catgatacaactccaatggcgctgcaaatgttcttctcccagttccctggttttaaggag
gttaggatggtggaggcaaaacccgggattgcctttgtggagtatggagatgaaatgcaa
gcaacagttgcaatgcagtcactccaaagtttaaagattggccagcaacagttgttgatc
acttatgccaagaaatag
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