Citrus sinensis (Valencia orange): 102610618
Help
Entry
102610618 CDS
T02983
Name
(RefSeq) serine/arginine-rich splicing factor RS2Z33-like isoform X1
KO
K12896
serine/arginine-rich splicing factor 7
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102610618
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cit03041
]
102610618
Spliceosome [BR:
cit03041
]
Common components
Common spliceosomal components
SR proteins
102610618
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
SLU7_N
zf-CCHC_5
RRM_5
zf-CCHC_3
CLIP1_ZNF
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
102610618
NCBI-ProteinID:
XP_006485980
LinkDB
All DBs
Position
4:join(3398816..3398922,3399646..3399685,3399885..3399980,3400124..3400320,3400405..3400488,3401001..3401415)
Genome browser
AA seq
312 aa
AA seq
DB search
MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDA
RYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAG
DWKNKCYRCGERGHIERNCQNSPKKLRRPRSYSRSPSPRRGRSRSRSYSRGRSDSRSRSP
VKRDRSVERFERRTRSPRDSRSPKRRRNSPPSSKGRKRSPTPDERSPQDQRSPSPRDRRQ
ANGSEYSGSPRGKSRSPVDDADGPEDRNYRSPPEENGRSRSRSRSLSPVPRDDRSPIDDD
DNHGDPRGSESN
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgttatgatgaccggtacggtggtacgcgtctctatgttggacgcttggcttca
cggacaagatcacgtgatcttgaggagatcttcagcagatatgggagaattcgcgatgtg
gatatgaagcgtgacttcgcctttgttgaatttagcgaccctcgtgatgctgacgatgca
agatatagcttaaatggtcgggatgttgatggaagccgtatcattgtggaatttgcaaga
ggggggccacgtggtcctggtggatctcgtgagtatcttggtcgaggccctcctcctgga
tctgggcgctgcttcaattgtgggattgatggccattgggctcgagactgcaaggctgga
gactggaagaataagtgttatcgctgtggtgaacgaggccacatagaacgaaattgtcaa
aacagtccaaagaagttaaggaggcctcggagttattcacgttctccaagtcctcgtcgt
ggtagaagcaggagccgtagttacagtagaggccgcagcgacagccgatcacgatcgcct
gtcaagagagataggagtgttgaacgttttgagagaagaacaaggagcccccgagacagt
aggagccctaagcgtcgcagaaattcaccaccatcatctaaaggtaggaagcgtagtcca
accccagatgaaagaagtccacaagatcaacgtagcccatccccaagggaccggaggcag
gctaatggatcagagtacagtggcagtccaaggggaaagagcagaagccctgtagacgat
gccgatggccctgaggataggaattacaggagccctcccgaagagaatggccgcagccga
agccgcagccgcagccttagtccagtccctagggatgataggagcccaattgatgatgat
gataatcatggggaccctagaggcagcgaatcaaattaa
DBGET
integrated database retrieval system
