Citrus sinensis (Valencia orange): 102610648
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Entry
102610648 CDS
T02983
Name
(RefSeq) serine/threonine-protein phosphatase PP1 isoform X1
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102610648
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cit01009
]
102610648
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cit03021
]
102610648
03019 Messenger RNA biogenesis [BR:
cit03019
]
102610648
03041 Spliceosome [BR:
cit03041
]
102610648
Enzymes [BR:
cit01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
102610648
Protein phosphatases and associated proteins [BR:
cit01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
102610648
Transcription machinery [BR:
cit03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
102610648
Messenger RNA biogenesis [BR:
cit03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
102610648
Spliceosome [BR:
cit03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
102610648
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
102610648
NCBI-ProteinID:
XP_006489742
UniProt:
A0A067F325
LinkDB
All DBs
Position
1:complement(join(19256169..19256192,19257155..19257376,19257465..19258024,19259146..19259320))
Genome browser
AA seq
326 aa
AA seq
DB search
MDPAVLDGVIRRLLEVRGKPGKQVQLSESEIRQLCVVSKGIFLRQPNLLEIEAPIKICGD
IHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGN
HECASVNRVYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDEKILCMHGGLSPDLHNLN
QIRSLPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELI
CRAHQVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKKPK
FSFGSTTTVKSGAPPSRMKSFLGAKV
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggatcctgctgttcttgacggtgtgatcaggaggcttcttgaagtcagaggcaaacca
gggaagcaagtgcagttatctgagtctgagattaggcagctttgtgttgtctctaagggt
attttcttgaggcagcccaaccttttagagattgaagctcctatcaagatctgtggagac
attcatggtcagtattctgatcttctgaggctttttgaatatggtgggttacctcctcgt
tccaattacttattcttgggggattatgtagatcgtggaaaacaaagtctggaaacaata
tgccttctccttgcatataaaataaaatatccggagaactttttccttcttaggggaaac
catgaatgtgcttcggtaaaccgtgtctatggattttatgatgagtgtaaacggagattc
aatgtcagactttggaaaatattcactgattgtttcaactgcctgcccgtggcagctctt
attgatgaaaagatactctgcatgcatggtggactttcccctgacttgcacaatttgaac
cagataaggagtttacctcgacctactgatgtcccagaaagtggtttgctctgcgatctc
ctatggtcggatcccagtaacgacattaaaggttgggaagcaaatgatagaggagtttca
tatgtctttggtgctgatagagtgacagagtttcttcagaagcacgatctcgagttaatt
tgtcgggcccaccaggttgtggaagatggatatgaattttttgctaatagacggctcata
actatattttcagcacctaattactgtggagagtttgacaatgctggtgcaatgatgagc
gtggatgagacactaatgtgttcttttcagatattaaagcctgcagataagaagccaaag
ttcagttttgggagcacgactacagttaagtcaggtgctcctccaagtagaatgaagtcg
tttcttggtgcaaaggtttaa
DBGET
integrated database retrieval system
