Citrus sinensis (Valencia orange): 102610721
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Entry
102610721 CDS
T02983
Name
(RefSeq) exopolygalacturonase isoform X1
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit00040
Pentose and glucuronate interconversions
cit01100
Metabolic pathways
Module
cit_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
102610721
Enzymes [BR:
cit01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
102610721
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
102610721
NCBI-ProteinID:
XP_006486583
UniProt:
A0A067FLT7
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All DBs
Position
8:complement(join(193842..194069,194153..194381,194489..194778,194948..195124,195207..195347,195701..195889))
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AA seq
417 aa
AA seq
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MNTELDSKLLLVLFIICFSDAFAGGSRTMIAQVKNIHYKETSSLLVNVKDFGARADGRTD
DSKAFEAAWKEACETTGAVTLLVPHGTYLIGPIKFAGPCKNVSNITVQMKGYLIASTNLS
EYRFGAGWVEFGGVEGLTLTGGGTFDGRGAKAWPYNGCPTHFNCKLLPTNVKFVAMKKTI
VRRITSVNSKSFHIALVECKNFRGSKIKISAPANSPNTDGIHIERSSSVHVSRSHIGTGD
DCISVGQGNSEVTIASITCGPGHGISVGSLGRYPNEGDVRGLVVRDSTMTGTMNGVRIKT
WANSPGSSAATNMTFENIIMNNVSNPIIIDQAYCPFTSCPTKPPSRVKLSDIYFKNIRGT
SSSAVAVALECSKGIPCQNIYLENVHLDLSSGEKQPTSSCKNVEAKYIGTQVPPPCA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgaatactgaactggattccaaattgctgttggtgctcttcattatttgtttcagtgat
gcttttgccgggggaagtagaacaatgatagcacaggtgaagaacatacattacaaggaa
actagctctcttctagtcaatgtgaaggacttcggtgcaagagcggatggtcgtactgat
gacagcaaagctttcgaagcagcatggaaggaggcatgtgagacaacaggtgcggtaact
cttctggtacctcatggaacatacctgattggtcccattaagttcgcaggcccctgcaaa
aatgtatcaaatataaccgttcagatgaagggttatctgattgcatcgacaaatttgtct
gagtatagatttggtgctggctgggttgaatttggtggggtggaggggctaaccctcacc
ggaggaggaacctttgatggccggggagctaaagcatggccttacaatgggtgccccacc
cacttcaactgcaaacttcttccaaccaatgtaaaatttgtagcaatgaaaaagactatt
gtccgaagaataacttcagtgaatagcaagtcctttcatatagctcttgtggaatgcaag
aacttcagaggcagtaaaattaaaatttcagcgccagccaacagtcccaacactgatggg
atccacattgaaagaagttctagtgtccatgtttcacgatcacatattggcactggtgat
gactgcatctctgttgggcaaggcaattccgaggtgactatcgctagcatcacttgtgga
cccgggcatggcatcagcgttggaagtttgggaagatacccgaatgaaggagatgtgagg
ggccttgttgtcagagacagcaccatgacagggaccatgaatggtgttaggattaagaca
tgggctaactcaccgggtagcagtgcagccaccaatatgacatttgaaaatatcataatg
aacaacgtaagcaatccgattataattgatcaggcatattgtccgttcacttcttgtccc
accaaaccaccatcccgggtgaagctaagtgatatatacttcaagaacataagagggaca
tcatcttctgcggtagcagtggcactggaatgcagcaaagggatcccatgccagaatatt
tacctagaaaatgttcatttagacttgtcatcaggagagaaacaacccacttcctcttgt
aaaaatgtagaagccaaatacattggtacccaggtaccaccaccgtgcgcttag
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