Citrus sinensis (Valencia orange): 102610849
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Entry
102610849 CDS
T02983
Name
(RefSeq) H/ACA ribonucleoprotein complex non-core subunit NAF1-like
KO
K14763
H/ACA ribonucleoprotein complex non-core subunit NAF1
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cit03009
]
102610849
Ribosome biogenesis [BR:
cit03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
102610849
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gar1
SR-25
Motif
Other DBs
NCBI-GeneID:
102610849
NCBI-ProteinID:
XP_006491626
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All DBs
Position
2:complement(join(13069570..13070724,13070873..13070950,13071769..13072623))
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AA seq
695 aa
AA seq
DB search
MERFMTEPSIEDQDHINQDSKVKNFKDPLYNFDSKNSDLSLADSFLDFDTIKELFEDYSP
NLDRIGLEKIEFGVLEKSLKMNQEEKFHFGNLVSDGSDCVVKVEEALVGGKEKNLSCCIE
ENMGKVSLVDAKSGIASDGDGSKKVDLVGNMGSFPADKDGAKSGIISDEKESESESESEN
EGSASSSSSSSSSSDNDEEEDEDEELKKEEAKKEVKRGLGELGELEEGEIEDVDREEMTG
GIDDDEDDEEDEVEMISVVDVDIDGGDEIDGCAREGPIRSKNELQVLPLVPQVNVVLQPH
HQMLPVGVVLSVRGVQVIVEGAEKHNPLNEGSILWITESRVPLGLIDEIFGPVKNPYYVV
RYNSENEIPAEIRVGTSISFVQDFANHVLDDKNLYKKGYDASGENDEELSDEAEFSDDEK
EAEYKRRQKMEKRGMDDQKPGNRKNNRKKVKNKDGMWRNGRPSAPQMDGVGQPLPNQNQH
PVSHVPASLDQGNCSTSSIGQGFVGGTGLVPHLQQMVQNTSFSTSPSAVWTDRIPPQQPQ
GTFFPNVFPTNGLPWPSQNYQQPPYQPMMNCGLFLQQSSQMSLPNVGLPGGPSNFFAGPT
YAPWQCLLGQNGLNQTIGQGLPQQPACPSVNASQGILPPNGLHVKQNNLQQTAVLPGSIE
APQQFNMGASSSRGRKPYHRGGGRFSGGRVRHQSR
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggaaaggtttatgactgaacccagcatcgaagaccaagatcacattaatcaagattca
aaagtgaaaaattttaaagacccactatacaattttgactcaaaaaacagcgacttgagt
ttggccgattcgtttcttgatttcgacacgataaaagagttgtttgaggattactcgcca
aacctagataggattgggttagaaaagattgaatttggggttcttgagaagagtttgaag
atgaatcaagaagaaaaattccattttgggaacctggtttcagatgggtctgattgtgtg
gtgaaggttgaagaggcattagtgggtgggaaagagaagaatctaagttgctgtattgag
gaaaacatggggaaagttagtttggttgatgccaagagtggaatagcgagtgatggggat
gggagtaagaaagttgatttggttggtaacatgggttcgtttccagccgacaaggatggt
gcgaagagtggaataataagtgatgagaaagagagtgaaagcgaatcagagtcggagaat
gaaggttctgcttcttcttcatcgtcgtctagtagtagcagtgataatgatgaggaagag
gacgaagatgaagagctaaaaaaagaggaagcgaagaaggaggtaaaaagaggattgggc
gagctgggtgagcttgaagaaggtgagatagaggatgttgacagagaggagatgactgga
gggattgatgatgatgaggatgatgaagaggatgaggtggaaatgatttctgttgttgat
gttgatattgatggtggggatgaaattgatggttgtgctagggaaggacctattaggtca
aagaacgagctgcaggttctacccctggtccctcaagtgaatgttgtcttgcaaccgcat
catcagatgctgcccgtaggagttgttttgtcggttcgtggtgtccaagttattgtagaa
ggggctgagaagcacaaccctctcaatgagggttcaatcctctggataactgaaagcaga
gtgccattgggactgattgatgaaatctttggacctgtaaaaaacccatactatgtggta
agatacaattcagaaaatgaaatccctgccgaaatccgtgtagggacttcgatctctttt
gttcaagattttgccaatcatgtgctcgatgacaagaatctttacaagaaagggtacgat
gcatctggtgagaatgatgaagagttatcagatgaagcagagttttcggatgatgagaaa
gaagctgagtacaagagaaggcaaaagatggaaaagaggggcatggatgaccagaaacct
ggtaacaggaaaaataatagaaagaaggtcaaaaataaggatggaatgtggagaaatgga
agaccttcagctccacaaatggatggagtaggacagccgctgccaaatcaaaaccagcat
cctgtctctcatgttccagcatctctggatcaaggtaattgttccacatcttctatagga
cagggttttgtaggtggaactggcttagttccacaccttcaacaaatggtgcagaatact
agtttttcaacatctccgagtgccgtctggacagataggattccacctcagcaaccacag
ggtaccttctttcctaatgtatttccaactaatggtttgccttggccttcccagaactat
cagcagcctccttatcagcccatgatgaactgtgggctatttctacagcagtctagtcag
atgtcacttcctaatgttggtctaccaggtggaccgtctaatttctttgcaggaccaaca
tatgcaccttggcagtgtcttctggggcaaaatggcttaaaccaaacaattgggcagggt
ttaccgcagcagcctgcttgcccatctgtaaatgcatcacaaggaattctgccacctaat
gggttacatgtaaagcaaaataatttgcaacaaactgctgttcttccaggcagcattgaa
gcaccccaacagtttaacatgggtgcatcttccagtcgtggaaggaagccatatcataga
ggaggtgggcgtttttctgggggaagagttcgccatcagtcccgatga
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